RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C FLO11P08640 1367 aa2.06□□□□□ -2.08
SOK1YDR006C HAP3P13434 144 aa2.05□□□□□ -2.08
SOK1YDR006C YEL045CP32616 141 aa2.05□□□□□ -2.08
SOK1YDR006C MRPS9P38120 278 aa2.05□□□□□ -2.08
SOK1YDR006C TIR3P40552 269 aa2.05□□□□□ -2.08
SOK1YDR006C MSL1P40567 111 aaPredicted RBP2.05□□□□□ -2.08
SOK1YDR006C SOM1Q05676 74 aa2.05□□□□□ -2.08
SOK1YDR006C KEI1Q06346 221 aa2.05□□□□□ -2.08
SOK1YDR006C IRC23Q08416 157 aa2.05□□□□□ -2.08
SOK1YDR006C RPS22AP0C0W1 130 aaKnown RBP2.05□□□□□ -2.08
SOK1YDR006C ECM34P38728 170 aa2.05□□□□□ -2.08
SOK1YDR006C YIR035CP40579 254 aa2.05□□□□□ -2.08
SOK1YDR006C ERV14P53173 138 aa2.05□□□□□ -2.08
SOK1YDR006C KTI11Q3E840 82 aa2.05□□□□□ -2.08
SOK1YDR006C ATG40Q99325 256 aa2.05□□□□□ -2.08
SOK1YDR006C FKS1P38631 1876 aaKnown RBP2.05□□□□□ -2.08
SOK1YDR006C LYS2P07702 1392 aa2.05□□□□□ -2.08
SOK1YDR006C YFL051CP43552 160 aa2.04□□□□□ -2.08
SOK1YDR006C LIP1Q03579 150 aa2.04□□□□□ -2.08
SOK1YDR006C IRC25Q07951 179 aa2.04□□□□□ -2.08
SOK1YDR006C PDR11P40550 1411 aa2.04□□□□□ -2.08
SOK1YDR006C PAU21P0CE86 164 aa2.04□□□□□ -2.08
SOK1YDR006C PAU22P0CE87 164 aa2.04□□□□□ -2.08
SOK1YDR006C QCR10P37299 77 aa2.04□□□□□ -2.08
SOK1YDR006C FLX1P40464 311 aa2.04□□□□□ -2.08
SOK1YDR006C LST8P41318 303 aa2.04□□□□□ -2.08
SOK1YDR006C POP3P53833 195 aaPredicted RBP2.04□□□□□ -2.08
SOK1YDR006C DAD4P69851 72 aa2.04□□□□□ -2.08
SOK1YDR006C YLR194CQ05777 254 aa2.04□□□□□ -2.08
SOK1YDR006C ATG41Q12048 136 aa2.04□□□□□ -2.08
SOK1YDR006C RPS22BQ3E7Y3 130 aaKnown RBP2.04□□□□□ -2.08
SOK1YDR006C MDS3P53094 1487 aa2.04□□□□□ -2.08
SOK1YDR006C HMRA2P0CY13 119 aa2.04□□□□□ -2.08
SOK1YDR006C PTH1P38876 190 aaKnown RBP2.04□□□□□ -2.08
SOK1YDR006C YAR068WP39564 161 aa2.04□□□□□ -2.08
SOK1YDR006C RPL13BP40212 199 aaKnown RBP2.04□□□□□ -2.08
SOK1YDR006C YFL065CP43539 102 aa2.04□□□□□ -2.08
SOK1YDR006C GRX5Q02784 150 aa2.04□□□□□ -2.08
SOK1YDR006C YPR203WQ08994 102 aa2.04□□□□□ -2.08
SOK1YDR006C YLR296WQ05898 108 aa2.03□□□□□ -2.08
SOK1YDR006C YPR145C-AQ2V2P0 78 aa2.03□□□□□ -2.08
SOK1YDR006C RAD6P06104 172 aa2.03□□□□□ -2.09
SOK1YDR006C YHL018WP38744 120 aaPredicted RBP2.03□□□□□ -2.09
SOK1YDR006C IPT1P38954 527 aa2.03□□□□□ -2.09
SOK1YDR006C ELP6Q04868 273 aa2.03□□□□□ -2.09
SOK1YDR006C PCC1Q3E833 88 aa2.03□□□□□ -2.09
SOK1YDR006C UBC4P15731 148 aa2.02□□□□□ -2.09
SOK1YDR006C SRB6P32570 121 aa2.02□□□□□ -2.09
SOK1YDR006C YKR045CP36138 183 aa2.02□□□□□ -2.09
SOK1YDR006C ATG8P38182 117 aaRIP-Chip data2.02□□□□□ -2.09not detected
SOK1YDR006C PAU15P40585 124 aa2.02□□□□□ -2.09
SOK1YDR006C MRPS16Q02608 121 aa2.02□□□□□ -2.09
SOK1YDR006C RAF1Q06891 181 aa2.02□□□□□ -2.09
SOK1YDR006C RPS23AP0CX29 145 aaKnown RBP2.02□□□□□ -2.09
SOK1YDR006C RPS23BP0CX30 145 aa2.02□□□□□ -2.09
SOK1YDR006C FMT1P32785 401 aa2.02□□□□□ -2.09
SOK1YDR006C COX23P38824 151 aa2.02□□□□□ -2.09
SOK1YDR006C YEL067CP39978 195 aa2.02□□□□□ -2.09
SOK1YDR006C GSC2P40989 1895 aa2.01□□□□□ -2.09
SOK1YDR006C POL2P21951 2222 aaKnown RBP2.01□□□□□ -2.09
SOK1YDR006C YLR236CA0A023PZG4 107 aa2.01□□□□□ -2.09
SOK1YDR006C FUN14P18411 198 aa2.01□□□□□ -2.09
SOK1YDR006C YCR099CP25657 155 aa2.01□□□□□ -2.09
SOK1YDR006C YBL059WP34224 193 aa2.01□□□□□ -2.09
SOK1YDR006C MRPS8Q03799 155 aa2.01□□□□□ -2.09
SOK1YDR006C YMR090WQ04304 227 aaKnown RBP2.01□□□□□ -2.09
SOK1YDR006C DAD1Q12248 94 aa2.01□□□□□ -2.09
SOK1YDR006C MYO2P19524 1574 aaKnown RBP2.01□□□□□ -2.09
SOK1YDR006C AGA2P32781 87 aa2.01□□□□□ -2.09
SOK1YDR006C PAU16P35994 123 aa2.01□□□□□ -2.09
SOK1YDR006C PEP8P40335 379 aa2.01□□□□□ -2.09
SOK1YDR006C YFL067WP43537 175 aa2.01□□□□□ -2.09
SOK1YDR006C YMR082CQ04276 118 aa2.01□□□□□ -2.09
SOK1YDR006C AVO2Q04749 426 aa2.01□□□□□ -2.09
SOK1YDR006C VPS68Q12016 184 aa2.01□□□□□ -2.09
SOK1YDR006C PPT2Q12036 173 aa2.01□□□□□ -2.09
SOK1YDR006C AUS1Q08409 1394 aa2□□□□□ -2.09
SOK1YDR006C MSB2P32334 1306 aa2□□□□□ -2.09
SOK1YDR006C ECM12O13529 151 aa2□□□□□ -2.09
SOK1YDR006C YBR013CP38215 129 aa2□□□□□ -2.09
SOK1YDR006C YIL054WP40524 105 aa2□□□□□ -2.09
SOK1YDR006C DCV1P43595 202 aa2□□□□□ -2.09
SOK1YDR006C YLR285C-AQ3E771 56 aa2□□□□□ -2.09
SOK1YDR006C TRM3Q07527 1436 aa2□□□□□ -2.09
SOK1YDR006C REV3P14284 1504 aa2□□□□□ -2.09
SOK1YDR006C SLH1P53327 1967 aaKnown RBP1.99□□□□□ -2.09
SOK1YDR006C HSP26P15992 214 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
SOK1YDR006C AIM4P38305 123 aaPredicted RBP1.99□□□□□ -2.09
SOK1YDR006C CYB5P40312 120 aa1.99□□□□□ -2.09
SOK1YDR006C SPC1P46965 94 aa1.99□□□□□ -2.09
SOK1YDR006C YPL261CQ08976 102 aa1.99□□□□□ -2.09
SOK1YDR006C POC4Q12245 148 aaPredicted RBP1.99□□□□□ -2.09
SOK1YDR006C ADE6P38972 1358 aaKnown RBP1.99□□□□□ -2.09
SOK1YDR006C GCV3P39726 170 aaPredicted RBP1.99□□□□□ -2.09
SOK1YDR006C DAN1P47178 298 aa1.99□□□□□ -2.09
SOK1YDR006C YGL260WP53056 76 aa1.99□□□□□ -2.09
SOK1YDR006C NMA1Q06178 401 aaKnown RBP1.99□□□□□ -2.09
SOK1YDR006C YPR195CQ06594 109 aa1.99□□□□□ -2.09
SOK1YDR006C FIT2Q08906 153 aa1.99□□□□□ -2.09
SOK1YDR006C YFR010W-AP0C5N0 62 aa1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms