RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG20	YDL113C	LSM4	P40070	187 aa	Known RBP	4.13	□□□□□ -1.75
ATG20	YDL113C	IMP2	P46972	177 aa		4.13	□□□□□ -1.75
ATG20	YDL113C	YJL027C	P47063	138 aa	Predicted RBP	4.13	□□□□□ -1.75
ATG20	YDL113C	YML122C	Q03207	126 aa		4.13	□□□□□ -1.75
ATG20	YDL113C	YCR024C-B	Q3E7Z8	88 aa		4.13	□□□□□ -1.75
ATG20	YDL113C	MRS1	P07266	363 aa		4.12	□□□□□ -1.75
ATG20	YDL113C	MRPL11	P36521	249 aa	Predicted RBP	4.12	□□□□□ -1.75
ATG20	YDL113C	LSM8	P47093	109 aa	Known RBP	4.12	□□□□□ -1.75
ATG20	YDL113C	YGR025W	P53216	100 aa		4.12	□□□□□ -1.75
ATG20	YDL113C	DAD4	P69851	72 aa		4.12	□□□□□ -1.75
ATG20	YDL113C	DDI2	P0CH63	225 aa		4.11	□□□□□ -1.75
ATG20	YDL113C	DDI3	P0CH64	225 aa		4.11	□□□□□ -1.75
ATG20	YDL113C	ABM1	P47146	123 aa		4.11	□□□□□ -1.75
ATG20	YDL113C	TDA4	P47153	279 aa		4.11	□□□□□ -1.75
ATG20	YDL113C	OST3	P48439	350 aa		4.11	□□□□□ -1.75
ATG20	YDL113C	SDS23	P53172	527 aa		4.11	□□□□□ -1.75
ATG20	YDL113C	ATP19	P81451	68 aa		4.11	□□□□□ -1.75
ATG20	YDL113C	RRG8	Q06109	277 aa		4.11	□□□□□ -1.75
ATG20	YDL113C	CYC3	P06182	269 aa		4.11	□□□□□ -1.75
ATG20	YDL113C	UBC7	Q02159	165 aa		4.11	□□□□□ -1.75
ATG20	YDL113C	GIM5	Q04493	163 aa		4.11	□□□□□ -1.75
ATG20	YDL113C	YPR063C	Q12160	140 aa		4.11	□□□□□ -1.75
ATG20	YDL113C	SEC4	P07560	215 aa	Known RBP	4.1	□□□□□ -1.75
ATG20	YDL113C	YER134C	P40081	178 aa		4.1	□□□□□ -1.75
ATG20	YDL113C	YFR045W	P43617	309 aa		4.1	□□□□□ -1.75
ATG20	YDL113C	LCB3	P47013	409 aa		4.1	□□□□□ -1.75
ATG20	YDL113C	TIM18	Q08749	192 aa		4.1	□□□□□ -1.75
ATG20	YDL113C	ATX2	Q12067	313 aa		4.1	□□□□□ -1.75
ATG20	YDL113C	DAD1	Q12248	94 aa		4.1	□□□□□ -1.75
ATG20	YDL113C	MRPL31	P14063	131 aa	Predicted RBP	4.09	□□□□□ -1.75
ATG20	YDL113C	RPB11	P38902	120 aa		4.09	□□□□□ -1.75
ATG20	YDL113C	CDC40	P40968	455 aa	Predicted RBP	4.09	□□□□□ -1.75
ATG20	YDL113C	AIM24	P47127	394 aa		4.09	□□□□□ -1.75
ATG20	YDL113C	YGR017W	P53210	297 aa		4.09	□□□□□ -1.75
ATG20	YDL113C	IZH1	Q03419	316 aa		4.09	□□□□□ -1.75
ATG20	YDL113C	YOL160W	Q08321	113 aa		4.09	□□□□□ -1.75
ATG20	YDL113C	WIP1	Q2V2P8	89 aa		4.09	□□□□□ -1.75
ATG20	YDL113C	COX2	P00410	251 aa		4.09	□□□□□ -1.76
ATG20	YDL113C	RPL23A	P0CX41	137 aa	Known RBP	4.09	□□□□□ -1.76
ATG20	YDL113C	RPL23B	P0CX42	137 aa	Known RBP	4.09	□□□□□ -1.76
ATG20	YDL113C	HMRA1	P0CY11	126 aa		4.09	□□□□□ -1.76
ATG20	YDL113C	TIR1	P10863	254 aa		4.09	□□□□□ -1.76
ATG20	YDL113C	ZRT1	P32804	376 aa		4.09	□□□□□ -1.76
ATG20	YDL113C	CAB4	P53332	305 aa		4.09	□□□□□ -1.76
ATG20	YDL113C	SRL1	Q08673	210 aa		4.09	□□□□□ -1.76
ATG20	YDL113C	CSM4	Q08955	156 aa		4.09	□□□□□ -1.76
ATG20	YDL113C	FUN14	P18411	198 aa		4.08	□□□□□ -1.76
ATG20	YDL113C	PRS4	P38063	326 aa	Predicted RBP	4.08	□□□□□ -1.76
ATG20	YDL113C	MST28	P39552	234 aa		4.08	□□□□□ -1.76
ATG20	YDL113C	POR2	P40478	281 aa		4.08	□□□□□ -1.76
ATG20	YDL113C	TOS8	P53147	276 aa		4.08	□□□□□ -1.76
ATG20	YDL113C	MST27	P53176	234 aa		4.08	□□□□□ -1.76
ATG20	YDL113C	YGR219W	P53307	113 aa		4.08	□□□□□ -1.76
ATG20	YDL113C	RPL15B	P54780	204 aa	Predicted RBP	4.08	□□□□□ -1.76
ATG20	YDL113C	YCR041W	P37265	110 aa		4.07	□□□□□ -1.76
ATG20	YDL113C	AME1	P38313	324 aa		4.07	□□□□□ -1.76
ATG20	YDL113C	ERV14	P53173	138 aa		4.07	□□□□□ -1.76
ATG20	YDL113C	DUG3	P53871	357 aa		4.07	□□□□□ -1.76
ATG20	YDL113C	PKR1	Q03880	122 aa	Known RBP	4.07	□□□□□ -1.76
ATG20	YDL113C	INO2	P26798	304 aa		4.07	□□□□□ -1.76
ATG20	YDL113C	VPS55	P47111	140 aa		4.07	□□□□□ -1.76
ATG20	YDL113C	THG1	P53215	237 aa	Known RBP	4.07	□□□□□ -1.76
ATG20	YDL113C	CAX4	P53223	239 aa		4.07	□□□□□ -1.76
ATG20	YDL113C	FSF1	Q12029	327 aa	Known RBP	4.07	□□□□□ -1.76
ATG20	YDL113C	YPR013C	Q12145	317 aa		4.07	□□□□□ -1.76
ATG20	YDL113C	RPS22B	Q3E7Y3	130 aa	Known RBP	4.07	□□□□□ -1.76
ATG20	YDL113C	RPB9	P27999	122 aa		4.06	□□□□□ -1.76
ATG20	YDL113C	SCM4	P32564	187 aa		4.06	□□□□□ -1.76
ATG20	YDL113C	GSP1	P32835	219 aa	Known RBP	4.06	□□□□□ -1.76
ATG20	YDL113C	GSP2	P32836	220 aa	Known RBP	4.06	□□□□□ -1.76
ATG20	YDL113C	YNL200C	P40165	246 aa	Known RBP	4.06	□□□□□ -1.76
ATG20	YDL113C	RPA43	P46669	326 aa		4.06	□□□□□ -1.76
ATG20	YDL113C	YJL028W	P47062	111 aa		4.06	□□□□□ -1.76
ATG20	YDL113C	LSO2	Q3E772	92 aa	Known RBP	4.06	□□□□□ -1.76
ATG20	YDL113C	COA6	Q3E846	104 aa		4.06	□□□□□ -1.76
ATG20	YDL113C	RPL12A	P0CX53	165 aa	Known RBP	4.05	□□□□□ -1.76
ATG20	YDL113C	RPL12B	P0CX54	165 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	YER190C-B	P0CX94	160 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	YEL077W-A	P0CX95	160 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	YGR296C-B	P0CX96	160 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	YPL283W-B	P0CX97	160 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	YPR204C-A	P0CX98	160 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	MRPL20	P22354	195 aa	Predicted RBP	4.05	□□□□□ -1.76
ATG20	YDL113C	MIC12	P38341	106 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	YDL186W	P48568	277 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	HOR7	Q05827	59 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	ARC18	Q05933	178 aa	Known RBP	4.05	□□□□□ -1.76
ATG20	YDL113C	YOR011W-A	Q3E807	68 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	YOL085C	Q99345	113 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	MDM10	P18409	493 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	SNF11	P38956	169 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	TEM1	P38987	245 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	PAU7	P39545	55 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	SEC72	P39742	193 aa	Known RBP	4.05	□□□□□ -1.76
ATG20	YDL113C	PRE5	P40302	234 aa	Known RBP	4.05	□□□□□ -1.76
ATG20	YDL113C	SPG4	Q04438	115 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	PRM7	Q12459	698 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	SCS22	Q6Q595	175 aa		4.05	□□□□□ -1.76
ATG20	YDL113C	CPT1	P17898	393 aa		4.04	□□□□□ -1.76
ATG20	YDL113C	GTO3	Q04806	366 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms