RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 HMGA1P17096 107 aaKnown RBP16.05■□□□□ 0.16
PHGDH-231ENST00000641939 NPR3P17342 541 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 PIK3CAP42336 1068 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 MAGEA11P43364 429 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 GCLMP48507 274 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 CLCN5P51795 746 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 MCCD1P59942 119 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-231ENST00000641939 PFKPQ01813 784 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 CYP27A1Q02318 531 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 PPP3CAQ08209 521 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 STIM1Q13586 685 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 DDR2Q16832 855 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 STXBP5Q5T5C0 1151 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 SDHAF4Q5VUM1 108 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 ANKRD40Q6AI12 368 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 ISM2Q6H9L7 571 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 EEF2KMTQ96G04 330 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 SMYD3Q9H7B4 428 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 IL21Q9HBE4 155 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 ARHGEF3Q9NR81 526 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 NME7Q9Y5B8 376 aa16.05■□□□□ 0.16
PHGDH-231ENST00000641939 TICRRQ7Z2Z1 1910 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 ASS1P00966 412 aaKnown RBP16.04■□□□□ 0.16
PHGDH-231ENST00000641939 PTPN1P18031 435 aaKnown RBP16.04■□□□□ 0.16
PHGDH-231ENST00000641939 BDNFP23560 247 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 GTF2H1P32780 548 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 PPP1R2P41236 205 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 VIPR2P41587 438 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 CDH8P55286 799 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 FKBP3Q00688 224 aaKnown RBP16.04■□□□□ 0.16
PHGDH-231ENST00000641939 LRRC63Q05C16 580 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 MDH1BQ5I0G3 518 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 GPR158Q5T848 1215 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 IER5LQ5T953 404 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 CWF19L1Q69YN2 538 aaKnown RBP16.04■□□□□ 0.16
PHGDH-231ENST00000641939 VSTM1Q6UX27 236 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 SCARA5Q6ZMJ2 495 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 SCN4BQ8IWT1 228 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 ZC3H3Q8IXZ2 948 aaKnown RBP16.04■□□□□ 0.16
PHGDH-231ENST00000641939 B3GALNT2Q8NCR0 500 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 E2F7Q96AV8 911 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 ELMO3Q96BJ8 720 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 PCED1BQ96HM7 432 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 PRRX2Q99811 253 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 DPEP3Q9H4B8 488 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 TMEM8AQ9HCN3 771 aa16.04■□□□□ 0.16
PHGDH-231ENST00000641939 UXTQ9UBK9 157 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-231ENST00000641939 MAGED2Q9UNF1 606 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-231ENST00000641939 TRIM49BA6NDI0 452 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 SLC38A8A6NNN8 435 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 STK25O00506 426 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 PSMA7O14818 248 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 SLC16A3O15427 465 aaKnown RBP16.03■□□□□ 0.16
PHGDH-231ENST00000641939 NOL4O94818 638 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 PSMC3P17980 439 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 AOC1P19801 751 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 RFX1P22670 979 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 CCNE1P24864 410 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 RAP1GAPP47736 663 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 NUBP1P53384 320 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 PMS1P54277 932 aaKnown RBP16.03■□□□□ 0.16
PHGDH-231ENST00000641939 NLRP12P59046 1061 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 CYP4F8P98187 520 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 GRM2Q14416 872 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 VITQ6UXI7 678 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 TMEM150AQ86TG1 271 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 ARID3BQ8IVW6 561 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-231ENST00000641939 MFSD6LQ8IWD5 586 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 TMEM105Q8N8V8 129 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 STKLD1Q8NE28 680 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 TAS1R2Q8TE23 839 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 DEPDC1BQ8WUY9 529 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 TRMT2BQ96GJ1 504 aaKnown RBP16.03■□□□□ 0.16
PHGDH-231ENST00000641939 DHTKD1Q96HY7 919 aaPredicted RBP16.03■□□□□ 0.16
PHGDH-231ENST00000641939 SHDQ96IW2 340 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 TRMT61BQ9BVS5 477 aaKnown RBP16.03■□□□□ 0.16
PHGDH-231ENST00000641939 IMPG2Q9BZV3 1241 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 SDCBP2Q9H190 292 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 TASP1Q9H6P5 420 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 MMRN2Q9H8L6 949 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 TBC1D17Q9HA65 648 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 ZMYM5Q9UJ78 669 aa16.03■□□□□ 0.16
PHGDH-231ENST00000641939 HEPACAM2A8MVW5 462 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 STX10O60499 249 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 F11P03951 625 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 BMP6P22004 513 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 DDX6P26196 483 aaKnown RBP eCLIP16.02■□□□□ 0.16
PHGDH-231ENST00000641939 ANXA13P27216 316 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 WEE1P30291 646 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 GRIK1P39086 918 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 MORC3Q14149 939 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 SLC44A4Q53GD3 710 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 KRT39Q6A163 491 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 SPOPLQ6IQ16 392 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 PHLDB3Q6NSJ2 640 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 DNASE1L2Q92874 299 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 TNIP3Q96KP6 325 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 SPATA17Q96L03 361 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 MYRFLQ96LU7 910 aa16.02■□□□□ 0.16
PHGDH-231ENST00000641939 CEP295NLQ96MC4 621 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms