RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 SLC18A3Q16572 532 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 ASTE1Q2TB18 679 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-230ENST00000641927 ARHGAP17Q68EM7 881 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 DENND1BQ6P3S1 775 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 FAM171BQ6P995 826 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 LCLAT1Q6UWP7 414 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 RSPO2Q6UXX9 243 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-230ENST00000641927 PALB2Q86YC2 1186 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 MICAL1Q8TDZ2 1067 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 ARNTL2Q8WYA1 636 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 PCDHB18PQ96TA0 734 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 B3GNT5Q9BYG0 378 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 ZBP1Q9H171 429 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 PRO3102Q9H379 93 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 TMLHEQ9NVH6 421 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 PCDHGC3Q9UN70 934 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 LZTS1Q9Y250 596 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 BACE2Q9Y5Z0 518 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 PLXNA4Q9HCM2 1894 aa18.53■□□□□ 0.56
PHGDH-230ENST00000641927 CXCL14O95715 111 aa18.52■□□□□ 0.56
PHGDH-230ENST00000641927 CTSAP10619 480 aa18.52■□□□□ 0.56
PHGDH-230ENST00000641927 OR1D2P34982 312 aa18.52■□□□□ 0.56
PHGDH-230ENST00000641927 GPM6BQ13491 265 aa18.52■□□□□ 0.56
PHGDH-230ENST00000641927 CCDC122Q5T0U0 273 aa18.52■□□□□ 0.56
PHGDH-230ENST00000641927 TRIM72Q6ZMU5 477 aa18.52■□□□□ 0.56
PHGDH-230ENST00000641927 C4orf50Q6ZRC1 276 aa18.52■□□□□ 0.56
PHGDH-230ENST00000641927 TOGARAM2Q6ZUX3 1019 aa18.52■□□□□ 0.56
PHGDH-230ENST00000641927 SPATA2LQ8IUW3 424 aaPredicted RBP18.52■□□□□ 0.56
PHGDH-230ENST00000641927 FUKQ8N0W3 1084 aa18.52■□□□□ 0.56
PHGDH-230ENST00000641927 SLC30A5Q8TAD4 765 aa18.52■□□□□ 0.56
PHGDH-230ENST00000641927 SPPL3Q8TCT6 385 aa18.52■□□□□ 0.56
PHGDH-230ENST00000641927 TIFAQ96CG3 184 aa18.52■□□□□ 0.56
PHGDH-230ENST00000641927 PGLYRP2Q96PD5 576 aa18.52■□□□□ 0.56
PHGDH-230ENST00000641927 HNRNPABQ99729 332 aaKnown RBP18.52■□□□□ 0.56
PHGDH-230ENST00000641927 DESI2Q9BSY9 194 aa18.52■□□□□ 0.56
PHGDH-230ENST00000641927 TLR9Q9NR96 1032 aa18.52■□□□□ 0.56
PHGDH-230ENST00000641927 SSX2IPQ9Y2D8 614 aa18.52■□□□□ 0.56
PHGDH-230ENST00000641927 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.51■□□□□ 0.55
PHGDH-230ENST00000641927 GRM6O15303 877 aa18.51■□□□□ 0.55
PHGDH-230ENST00000641927 TBC1D4O60343 1298 aa18.51■□□□□ 0.55
PHGDH-230ENST00000641927 ERVFC1P60507 584 aa18.51■□□□□ 0.55
PHGDH-230ENST00000641927 UBE3AQ05086 875 aa18.51■□□□□ 0.55
PHGDH-230ENST00000641927 PTPN14Q15678 1187 aa18.51■□□□□ 0.55
PHGDH-230ENST00000641927 NFE2Q16621 373 aaPredicted RBP18.51■□□□□ 0.55
PHGDH-230ENST00000641927 NAA35Q5VZE5 725 aa18.51■□□□□ 0.55
PHGDH-230ENST00000641927 ALKBH5Q6P6C2 394 aaKnown RBP18.51■□□□□ 0.55
PHGDH-230ENST00000641927 TMEM35BQ8NCS4 154 aa18.51■□□□□ 0.55
PHGDH-230ENST00000641927 CPA5Q8WXQ8 436 aa18.51■□□□□ 0.55
PHGDH-230ENST00000641927 PKMYT1Q99640 499 aa18.51■□□□□ 0.55
PHGDH-230ENST00000641927 ZNF518BQ9C0D4 1074 aa18.51■□□□□ 0.55
PHGDH-230ENST00000641927 KRT82Q9NSB4 513 aa18.51■□□□□ 0.55
PHGDH-230ENST00000641927 ABI2Q9NYB9 513 aaPredicted RBP18.51■□□□□ 0.55
PHGDH-230ENST00000641927 NAGPAQ9UK23 515 aa18.51■□□□□ 0.55
PHGDH-230ENST00000641927 ATP8B3O60423 1300 aa18.51■□□□□ 0.55
PHGDH-230ENST00000641927 EIF3CLB5ME19 914 aaKnown RBP18.5■□□□□ 0.55
PHGDH-230ENST00000641927 ADAM12O43184 909 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 BDNFP23560 247 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 DNAJB1P25685 340 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 SLC8A3P57103 927 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 SMAD3P84022 425 aaKnown RBP18.5■□□□□ 0.55
PHGDH-230ENST00000641927 CREMQ03060 361 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 CLEC16AQ2KHT3 1053 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 HS1BP3Q53T59 392 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 PLPP4Q5VZY2 271 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 FAM35AQ86V20 835 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 TTC30AQ86WT1 665 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 ANKRD52Q8NB46 1076 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 C1orf131Q8NDD1 294 aaKnown RBP18.5■□□□□ 0.55
PHGDH-230ENST00000641927 ACRBPQ8NEB7 543 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 OLIG1Q8TAK6 271 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 SECISBP2LQ93073 1101 aaKnown RBP18.5■□□□□ 0.55
PHGDH-230ENST00000641927 EIF3CQ99613 913 aaKnown RBP18.5■□□□□ 0.55
PHGDH-230ENST00000641927 CLSTN3Q9BQT9 956 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 RHOBTB2Q9BYZ6 727 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.5■□□□□ 0.55
PHGDH-230ENST00000641927 TAS2R14Q9NYV8 317 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 H3BNC9 293 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 LPXNO60711 386 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 LSM8O95777 96 aaKnown RBP18.5■□□□□ 0.55
PHGDH-230ENST00000641927 CYP1A1P04798 512 aaPredicted RBP18.5■□□□□ 0.55
PHGDH-230ENST00000641927 FAM200BP0CF97 657 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 NSFP46459 744 aaKnown RBP18.5■□□□□ 0.55
PHGDH-230ENST00000641927 BCAT1P54687 386 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 ROR1Q01973 937 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 SMC1AQ14683 1233 aaKnown RBP18.5■□□□□ 0.55
PHGDH-230ENST00000641927 SLC8B1Q6J4K2 584 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 RNF19BQ6ZMZ0 732 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 PAQR9Q6ZVX9 377 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 DNAAF5Q86Y56 855 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 SMARCD1Q96GM5 515 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 LHX5Q9H2C1 402 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 CHD7Q9P2D1 2997 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 PCDHB5Q9Y5E4 795 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 CHD9Q3L8U1 2897 aa18.5■□□□□ 0.55
PHGDH-230ENST00000641927 ZNF263O14978 683 aa18.49■□□□□ 0.55
PHGDH-230ENST00000641927 AP1G2O75843 785 aa18.49■□□□□ 0.55
PHGDH-230ENST00000641927 NOMO3P69849 1222 aa18.49■□□□□ 0.55
PHGDH-230ENST00000641927 KRT83P78385 493 aa18.49■□□□□ 0.55
PHGDH-230ENST00000641927 BST2Q10589 180 aaKnown RBP18.49■□□□□ 0.55
PHGDH-230ENST00000641927 GPR17Q13304 367 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms