RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 GPD2P43304 727 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 ARSEP51690 589 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 ACVR2BQ13705 512 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 TAF5Q15542 800 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 OASLQ15646 514 aaKnown RBP17.86■□□□□ 0.45
PHGDH-229ENST00000641891 ERMARDQ5T6L9 678 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 MFSD5Q6N075 450 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 B4GALNT4Q76KP1 1039 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 ATXN2LQ8WWM7 1075 aaKnown RBP17.86■□□□□ 0.45
PHGDH-229ENST00000641891 TMEM121Q9BTD3 319 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 CYP3A43Q9HB55 503 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 RNF19AQ9NV58 838 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 SLC45A1Q9Y2W3 748 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 SCN4AP35499 1836 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 PPEF2O14830 753 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 GCLCP48506 637 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-229ENST00000641891 VCPP55072 806 aaKnown RBP17.86■□□□□ 0.45
PHGDH-229ENST00000641891 DRICH1Q6PGQ1 229 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-229ENST00000641891 POLNQ7Z5Q5 900 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 ANKRD23Q86SG2 305 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 CROCCP2Q86T23 111 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 EXOC3L1Q86VI1 746 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 BBOF1Q8ND07 529 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 PTPN18Q99952 460 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 ROPN1BQ9BZX4 212 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-229ENST00000641891 ROPN1Q9HAT0 212 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-229ENST00000641891 CDHR5Q9HBB8 845 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 ITGA11Q9UKX5 1188 aa17.86■□□□□ 0.45
PHGDH-229ENST00000641891 IQCA1LA6NCM1 817 aa17.85■□□□□ 0.45
PHGDH-229ENST00000641891 DNALI1O14645 258 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-229ENST00000641891 P4HA1P13674 534 aa17.85■□□□□ 0.45
PHGDH-229ENST00000641891 CREB1P16220 341 aa17.85■□□□□ 0.45
PHGDH-229ENST00000641891 RBP5P82980 135 aa17.85■□□□□ 0.45
PHGDH-229ENST00000641891 LMNB2Q03252 620 aa17.85■□□□□ 0.45
PHGDH-229ENST00000641891 GPS1Q13098 491 aa17.85■□□□□ 0.45
PHGDH-229ENST00000641891 RAB6CQ53S08 254 aa17.85■□□□□ 0.45
PHGDH-229ENST00000641891 PRAMEF19Q5SWL8 479 aa17.85■□□□□ 0.45
PHGDH-229ENST00000641891 C12orf29Q8N999 325 aa17.85■□□□□ 0.45
PHGDH-229ENST00000641891 FAXDC2Q96IV6 333 aa17.85■□□□□ 0.45
PHGDH-229ENST00000641891 PIWIL1Q96J94 861 aaKnown RBP17.85■□□□□ 0.45
PHGDH-229ENST00000641891 ADPGKQ9BRR6 497 aa17.85■□□□□ 0.45
PHGDH-229ENST00000641891 TINF2Q9BSI4 451 aa17.85■□□□□ 0.45
PHGDH-229ENST00000641891 RAB6CQ9H0N0 254 aa17.85■□□□□ 0.45
PHGDH-229ENST00000641891 BARX2Q9UMQ3 279 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-229ENST00000641891 C2CD2Q9Y426 696 aa17.85■□□□□ 0.45
PHGDH-229ENST00000641891 VDRP11473 427 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 GSCP56915 257 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-229ENST00000641891 PLCB3Q01970 1234 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 ZNF268Q14587 947 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-229ENST00000641891 CNGA2Q16280 664 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 DGKDQ16760 1214 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 FAM102AQ5T9C2 384 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-229ENST00000641891 SH3PXD2AQ5TCZ1 1133 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 ZCCHC9Q8N567 271 aaKnown RBP17.84■□□□□ 0.45
PHGDH-229ENST00000641891 FNIP1Q8TF40 1166 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 LENG1Q96BZ8 264 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-229ENST00000641891 MCRS1Q96EZ8 462 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 RBM15Q96T37 977 aaKnown RBP eCLIP17.84■□□□□ 0.454e-7■■■□□ 17.3
PHGDH-229ENST00000641891 EIF2AQ9BY44 585 aaKnown RBP17.84■□□□□ 0.45
PHGDH-229ENST00000641891 TSPYL1Q9H0U9 437 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 SNTG2Q9NY99 539 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 DDX20Q9UHI6 824 aaKnown RBP17.84■□□□□ 0.45
PHGDH-229ENST00000641891 HES2Q9Y543 173 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 CITO14578 2027 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 SGK1O00141 431 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 HOXD8P13378 290 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-229ENST00000641891 KDELR1P24390 212 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 HOXA11P31270 313 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-229ENST00000641891 GRM5P41594 1212 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 GABRB2P47870 512 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 CDR1P51861 262 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 INCA1Q0VD86 236 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 HP1BP3Q5SSJ5 553 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-229ENST00000641891 CYP4F22Q6NT55 531 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 TRNP1Q6NT89 227 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 PNMA8AQ86V59 439 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-229ENST00000641891 HSPH1Q92598 858 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 CENPTQ96BT3 561 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 ZMAT2Q96NC0 199 aaKnown RBP17.84■□□□□ 0.45
PHGDH-229ENST00000641891 SERPINB12Q96P63 405 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 ADAMTS10Q9H324 1103 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 WDR35Q9P2L0 1181 aa17.84■□□□□ 0.45
PHGDH-229ENST00000641891 CST8O60676 142 aa17.83■□□□□ 0.45
PHGDH-229ENST00000641891 IFNB1P01574 187 aa17.83■□□□□ 0.45
PHGDH-229ENST00000641891 HMGCRP04035 888 aa17.83■□□□□ 0.45
PHGDH-229ENST00000641891 PFKMP08237 780 aa17.83■□□□□ 0.45
PHGDH-229ENST00000641891 DRD4P21917 467 aa17.83■□□□□ 0.45
PHGDH-229ENST00000641891 MIPP30301 263 aa17.83■□□□□ 0.45
PHGDH-229ENST00000641891 OTUD4Q01804 1114 aaKnown RBP17.83■□□□□ 0.45
PHGDH-229ENST00000641891 KYAT1Q16773 422 aa17.83■□□□□ 0.45
PHGDH-229ENST00000641891 HADHQ16836 314 aaKnown RBP17.83■□□□□ 0.45
PHGDH-229ENST00000641891 PLEKHH3Q7Z736 793 aa17.83■□□□□ 0.45
PHGDH-229ENST00000641891 CYP4X1Q8N118 509 aa17.83■□□□□ 0.45
PHGDH-229ENST00000641891 SLC35B2Q8TB61 432 aa17.83■□□□□ 0.45
PHGDH-229ENST00000641891 ACTL9Q8TC94 416 aa17.83■□□□□ 0.45
PHGDH-229ENST00000641891 NKD2Q969F2 451 aaPredicted RBP17.83■□□□□ 0.45
PHGDH-229ENST00000641891 PEBP4Q96S96 227 aa17.83■□□□□ 0.45
PHGDH-229ENST00000641891 STMN4Q9H169 189 aaPredicted RBP17.83■□□□□ 0.45
PHGDH-229ENST00000641891 ABHD16BQ9H3Z7 469 aa17.83■□□□□ 0.45
PHGDH-229ENST00000641891 TUBGCP4Q9UGJ1 667 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms