RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 KATNBL1Q9H079 304 aa7.72□□□□□ -1.17
SCARB2-224ENST00000640880 UPF2Q9HAU5 1272 aaKnown RBP7.72□□□□□ -1.17
SCARB2-224ENST00000640880 A1CFQ9NQ94 594 aaKnown RBP7.72□□□□□ -1.17
SCARB2-224ENST00000640880 SIRT5Q9NXA8 310 aa7.72□□□□□ -1.17
SCARB2-224ENST00000640880 BCCIPQ9P287 314 aaKnown RBP eCLIP7.72□□□□□ -1.17
SCARB2-224ENST00000640880 CFAP97Q9P2B7 532 aa7.72□□□□□ -1.17
SCARB2-224ENST00000640880 IFT80Q9P2H3 777 aaPredicted RBP7.72□□□□□ -1.17
SCARB2-224ENST00000640880 FBXO2Q9UK22 296 aaPredicted RBP7.72□□□□□ -1.17
SCARB2-224ENST00000640880 ALS2Q96Q42 1657 aa7.72□□□□□ -1.17
SCARB2-224ENST00000640880 ACEP12821 1306 aa7.72□□□□□ -1.17
SCARB2-224ENST00000640880 CGNL1Q0VF96 1302 aa7.72□□□□□ -1.17
SCARB2-224ENST00000640880 SBNO1A3KN83 1393 aa7.71□□□□□ -1.17
SCARB2-224ENST00000640880 POLR3AO14802 1390 aaPredicted RBP7.71□□□□□ -1.17
SCARB2-224ENST00000640880 MED1Q15648 1581 aaPredicted RBP7.71□□□□□ -1.17
SCARB2-224ENST00000640880 KIF20BQ96Q89 1820 aa7.71□□□□□ -1.17
SCARB2-224ENST00000640880 PIP5K1BO14986 540 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 KIAA0391O15091 583 aaKnown RBP7.71□□□□□ -1.18
SCARB2-224ENST00000640880 MTSS1O43312 755 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 SNX2O60749 519 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 RNASEH2AO75792 299 aaKnown RBP7.71□□□□□ -1.18
SCARB2-224ENST00000640880 GNAI2P04899 355 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 FURINP09958 794 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 RARBP10826 455 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 CNTFP26441 200 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 CASRP41180 1078 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 CALD1Q05682 793 aaKnown RBP7.71□□□□□ -1.18
SCARB2-224ENST00000640880 MFSD14BQ5SR56 506 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 C20orf194Q5TEA3 1177 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 DCAF12L1Q5VU92 463 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 RETSATQ6NUM9 610 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 SLC15A4Q8N697 577 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 DNAJC5GQ8N7S2 189 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 SLC7A6OSQ96CW6 309 aaPredicted RBP7.71□□□□□ -1.18
SCARB2-224ENST00000640880 TESK2Q96S53 571 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 MAP7D2Q96T17 732 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 SEC62Q99442 399 aaKnown RBP7.71□□□□□ -1.18
SCARB2-224ENST00000640880 CNPPD1Q9BV87 410 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.71□□□□□ -1.18
SCARB2-224ENST00000640880 KIAA1683Q9H0B3 1180 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 NECTIN3Q9NQS3 549 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 SMC4Q9NTJ3 1288 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 RGL1Q9NZL6 768 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 CTDP1Q9Y5B0 961 aaPredicted RBP7.71□□□□□ -1.18
SCARB2-224ENST00000640880 ABCA3Q99758 1704 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 PNPLA6Q8IY17 1366 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 DISP3Q9P2K9 1392 aa7.71□□□□□ -1.18
SCARB2-224ENST00000640880 USP6P35125 1406 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 MYOM1P52179 1685 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 A0A087WWL8 130 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 TCRBV7S2A1N4TA0A589 114 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 DYTNA2CJ06 578 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 PRSS47A8MTI9 375 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 RASSF9O75901 435 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 POLBP06746 335 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 TXNP10599 105 aaKnown RBP7.7□□□□□ -1.18
SCARB2-224ENST00000640880 GABRB3P28472 473 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 SLC11A2P49281 568 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 CDR1P51861 262 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 PSMC1P62191 440 aaKnown RBP7.7□□□□□ -1.18
SCARB2-224ENST00000640880 ARHGAP15Q53QZ3 475 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 KRT40Q6A162 431 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 OTUD7BQ6GQQ9 843 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 SULT6B1Q6IMI4 303 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 FAM180BQ6P0A1 224 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 BORAQ6PGQ7 559 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 KRBA2Q6ZNG9 492 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 VGLL2Q8N8G2 317 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 LINC00482Q8N8I6 264 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 NUDT10Q8NFP7 164 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 STT3BQ8TCJ2 826 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 RUBCNQ92622 972 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 NUDT11Q96G61 164 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 CEP95Q96GE4 821 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 LIN37Q96GY3 246 aaPredicted RBP7.7□□□□□ -1.18
SCARB2-224ENST00000640880 NEUROD6Q96NK8 337 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 SLC26A6Q9BXS9 759 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 GGA3Q9NZ52 723 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 SLC23A1Q9UHI7 598 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 NRBP1Q9UHY1 535 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 MID2Q9UJV3 735 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 HDAC9Q9UKV0 1011 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 NRKQ7Z2Y5 1582 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 SPATA31A3Q5VYP0 1347 aa7.7□□□□□ -1.18
SCARB2-224ENST00000640880 PHRF1Q9P1Y6 1649 aaKnown RBP7.7□□□□□ -1.18
SCARB2-224ENST00000640880 MYO1CO00159 1063 aa7.69□□□□□ -1.18
SCARB2-224ENST00000640880 NRP1O14786 923 aa7.69□□□□□ -1.18
SCARB2-224ENST00000640880 SLC43A1O75387 559 aa7.69□□□□□ -1.18
SCARB2-224ENST00000640880 DNAJB5O75953 348 aa7.69□□□□□ -1.18
SCARB2-224ENST00000640880 GRPP07492 148 aa7.69□□□□□ -1.18
SCARB2-224ENST00000640880 GLI1P08151 1106 aa7.69□□□□□ -1.18
SCARB2-224ENST00000640880 ITGA5P08648 1049 aa7.69□□□□□ -1.18
SCARB2-224ENST00000640880 CKMT1AP12532 417 aa7.69□□□□□ -1.18
SCARB2-224ENST00000640880 ATP5JP18859 108 aa7.69□□□□□ -1.18
SCARB2-224ENST00000640880 IGFBP6P24592 240 aaPredicted RBP7.69□□□□□ -1.18
SCARB2-224ENST00000640880 IL1R2P27930 398 aa7.69□□□□□ -1.18
SCARB2-224ENST00000640880 RRADP55042 308 aa7.69□□□□□ -1.18
SCARB2-224ENST00000640880 UCP3P55916 312 aa7.69□□□□□ -1.18
SCARB2-224ENST00000640880 BPIFB4P59827 614 aa7.69□□□□□ -1.18
SCARB2-224ENST00000640880 POU6F2P78424 691 aaPredicted RBP7.69□□□□□ -1.18
SCARB2-224ENST00000640880 MPP1Q00013 466 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms