RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 PIAS3Q9Y6X2 628 aa26.97■■□□□ 1.91
VEGFA-230ENST00000640482 CALUO43852 315 aaPredicted RBP26.96■■□□□ 1.91
VEGFA-230ENST00000640482 TACC1O75410 805 aa26.96■■□□□ 1.91
VEGFA-230ENST00000640482 RHOBTB3O94955 611 aa26.96■■□□□ 1.91
VEGFA-230ENST00000640482 F11P03951 625 aa26.96■■□□□ 1.91
VEGFA-230ENST00000640482 NR3C1P04150 777 aa26.96■■□□□ 1.91
VEGFA-230ENST00000640482 PDGFRBP09619 1106 aa26.96■■□□□ 1.91
VEGFA-230ENST00000640482 MAGEA11P43364 429 aa26.96■■□□□ 1.91
VEGFA-230ENST00000640482 CASP4P49662 377 aa26.96■■□□□ 1.91
VEGFA-230ENST00000640482 DPYDQ12882 1025 aa26.96■■□□□ 1.91
VEGFA-230ENST00000640482 BIRC3Q13489 604 aa26.96■■□□□ 1.91
VEGFA-230ENST00000640482 CCDC142Q17RM4 750 aa26.96■■□□□ 1.91
VEGFA-230ENST00000640482 SDHAF4Q5VUM1 108 aa26.96■■□□□ 1.91
VEGFA-230ENST00000640482 SCN4BQ8IWT1 228 aa26.96■■□□□ 1.91
VEGFA-230ENST00000640482 MRPS31Q92665 395 aaKnown RBP26.96■■□□□ 1.91
VEGFA-230ENST00000640482 MIA3Q5JRA6 1907 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 SOBPA7XYQ1 873 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 ARNTLO00327 626 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 ATP2C2O75185 946 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 NOL4O94818 638 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 ZNF202O95125 648 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 GNL1P36915 607 aaPredicted RBP26.95■■□□□ 1.9
VEGFA-230ENST00000640482 MLLT6P55198 1093 aaPredicted RBP26.95■■□□□ 1.9
VEGFA-230ENST00000640482 MYL6P60660 151 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 ARHGAP29Q52LW3 1261 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 VSTM1Q6UX27 236 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 TMEM150AQ86TG1 271 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 CMTM8Q8IZV2 173 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 PLEKHO2Q8TD55 490 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 BPIFB1Q8TDL5 484 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 MYLPFQ96A32 169 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 CLDN23Q96B33 292 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 TRMT2BQ96GJ1 504 aaKnown RBP26.95■■□□□ 1.9
VEGFA-230ENST00000640482 MSANTD3Q96H12 275 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 MRPL45Q9BRJ2 306 aaKnown RBP26.95■■□□□ 1.9
VEGFA-230ENST00000640482 SLC46A2Q9BY10 475 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 CRTAC1Q9NQ79 661 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 SPATA6Q9NWH7 488 aaPredicted RBP26.95■■□□□ 1.9
VEGFA-230ENST00000640482 FRMD4BQ9Y2L6 1034 aa26.95■■□□□ 1.9
VEGFA-230ENST00000640482 PIEZO1Q92508 2521 aa26.94■■□□□ 1.9
VEGFA-230ENST00000640482 NUP210Q8TEM1 1887 aaPredicted RBP26.94■■□□□ 1.9
VEGFA-230ENST00000640482 SLC38A8A6NNN8 435 aa26.94■■□□□ 1.9
VEGFA-230ENST00000640482 LRRIQ3A6PVS8 624 aaPredicted RBP26.94■■□□□ 1.9
VEGFA-230ENST00000640482 PRAMEF12O95522 483 aa26.94■■□□□ 1.9
VEGFA-230ENST00000640482 AVPR1AP37288 418 aa26.94■■□□□ 1.9
VEGFA-230ENST00000640482 RPS9P46781 194 aaKnown RBP26.94■■□□□ 1.9
VEGFA-230ENST00000640482 CLDN10P78369 228 aa26.94■■□□□ 1.9
VEGFA-230ENST00000640482 NUCB2P80303 420 aa26.94■■□□□ 1.9
VEGFA-230ENST00000640482 C1orf228Q6PIY5 440 aa26.94■■□□□ 1.9
VEGFA-230ENST00000640482 CELF5Q8N6W0 485 aaKnown RBP26.94■■□□□ 1.9
VEGFA-230ENST00000640482 STKLD1Q8NE28 680 aa26.94■■□□□ 1.9
VEGFA-230ENST00000640482 OR6B3Q8NGW1 331 aa26.94■■□□□ 1.9
VEGFA-230ENST00000640482 FAM3CQ92520 227 aa26.94■■□□□ 1.9
VEGFA-230ENST00000640482 NKD2Q969F2 451 aaPredicted RBP26.94■■□□□ 1.9
VEGFA-230ENST00000640482 XYLT2Q9H1B5 865 aa26.94■■□□□ 1.9
VEGFA-230ENST00000640482 NXF1Q9UBU9 619 aaKnown RBP26.94■■□□□ 1.9
VEGFA-230ENST00000640482 NDRG2Q9UN36 371 aaKnown RBP26.94■■□□□ 1.9
VEGFA-230ENST00000640482 TRAF3IP3Q9Y228 551 aa26.94■■□□□ 1.9
VEGFA-230ENST00000640482 CACNA1HO95180 2353 aa26.93■■□□□ 1.9
VEGFA-230ENST00000640482 SHISA7A6NL88 538 aa26.93■■□□□ 1.9
VEGFA-230ENST00000640482 CLSTN1O94985 981 aa26.93■■□□□ 1.9
VEGFA-230ENST00000640482 PLCB2Q00722 1185 aa26.93■■□□□ 1.9
VEGFA-230ENST00000640482 CYP27A1Q02318 531 aa26.93■■□□□ 1.9
VEGFA-230ENST00000640482 KCNB1Q14721 858 aa26.93■■□□□ 1.9
VEGFA-230ENST00000640482 TDRD10Q5VZ19 366 aaKnown RBP26.93■■□□□ 1.9
VEGFA-230ENST00000640482 CEP135Q66GS9 1140 aa26.93■■□□□ 1.9
VEGFA-230ENST00000640482 MAB21L3Q8N8X9 362 aa26.93■■□□□ 1.9
VEGFA-230ENST00000640482 MYCBPAPQ8TBZ2 947 aa26.93■■□□□ 1.9
VEGFA-230ENST00000640482 MYRFLQ96LU7 910 aa26.93■■□□□ 1.9
VEGFA-230ENST00000640482 CEP295NLQ96MC4 621 aa26.93■■□□□ 1.9
VEGFA-230ENST00000640482 LRRC3BQ96PB8 259 aa26.93■■□□□ 1.9
VEGFA-230ENST00000640482 C8orf33Q9H7E9 229 aaPredicted RBP26.93■■□□□ 1.9
VEGFA-230ENST00000640482 VRTNQ9H8Y1 702 aa26.93■■□□□ 1.9
VEGFA-230ENST00000640482 THG1LQ9NWX6 298 aaKnown RBP26.93■■□□□ 1.9
VEGFA-230ENST00000640482 COL4A2P08572 1712 aa26.93■■□□□ 1.9
VEGFA-230ENST00000640482 LAMTOR5O43504 91 aa26.92■■□□□ 1.9
VEGFA-230ENST00000640482 BDNFP23560 247 aa26.92■■□□□ 1.9
VEGFA-230ENST00000640482 KPNA1P52294 538 aaPredicted RBP26.92■■□□□ 1.9
VEGFA-230ENST00000640482 ZNF699Q32M78 642 aa26.92■■□□□ 1.9
VEGFA-230ENST00000640482 ZC3H14Q6PJT7 736 aaKnown RBP26.92■■□□□ 1.9
VEGFA-230ENST00000640482 PCED1BQ96HM7 432 aa26.92■■□□□ 1.9
VEGFA-230ENST00000640482 KIF9Q9HAQ2 790 aa26.92■■□□□ 1.9
VEGFA-230ENST00000640482 TICRRQ7Z2Z1 1910 aa26.91■■□□□ 1.9
VEGFA-230ENST00000640482 GOLGA6L4A6NEF3 574 aa26.91■■□□□ 1.9
VEGFA-230ENST00000640482 PRR23AA6NEV1 266 aa26.91■■□□□ 1.9
VEGFA-230ENST00000640482 C4BPAP04003 597 aaKnown RBP26.91■■□□□ 1.9
VEGFA-230ENST00000640482 SP9P0CG40 484 aa26.91■■□□□ 1.9
VEGFA-230ENST00000640482 GRIK1P39086 918 aa26.91■■□□□ 1.9
VEGFA-230ENST00000640482 NCOA4Q13772 614 aa26.91■■□□□ 1.9
VEGFA-230ENST00000640482 ZNF667Q5HYK9 610 aa26.91■■□□□ 1.9
VEGFA-230ENST00000640482 MDH1BQ5I0G3 518 aa26.91■■□□□ 1.9
VEGFA-230ENST00000640482 TXNDC8Q6A555 127 aa26.91■■□□□ 1.9
VEGFA-230ENST00000640482 ASCL5Q7RTU5 278 aa26.91■■□□□ 1.9
VEGFA-230ENST00000640482 MON1AQ86VX9 555 aa26.91■■□□□ 1.9
VEGFA-230ENST00000640482 TMC2Q8TDI7 906 aa26.91■■□□□ 1.9
VEGFA-230ENST00000640482 SPATA17Q96L03 361 aa26.91■■□□□ 1.9
VEGFA-230ENST00000640482 SMG9Q9H0W8 520 aaKnown RBP26.91■■□□□ 1.9
VEGFA-230ENST00000640482 A8MXQ7 604 aa26.9■■□□□ 1.9
VEGFA-230ENST00000640482 TRIM66O15016 1216 aa26.9■■□□□ 1.9
VEGFA-230ENST00000640482 MAPK13O15264 365 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms