RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ACAD9Q9H845 621 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 EDF1O60869 148 aaKnown RBP15.32■□□□□ 0.04
SCARB2-221ENST00000640341 NAMPTP43490 491 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 ARL4CP56559 192 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 PDK4Q16654 411 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 PTPN20Q4JDL3 420 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 ASRGL1Q7L266 308 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 WDTC1Q8N5D0 677 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 AGBL3Q8NEM8 1001 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 RDM1Q8NG50 284 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 CCHCR1Q8TD31 782 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 CFAP36Q96G28 342 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 EBF2Q9HAK2 575 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 ZNFX1Q9P2E3 1918 aaKnown RBP15.32■□□□□ 0.04
SCARB2-221ENST00000640341 CNTNAP2Q9UHC6 1331 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 RPL22P35268 128 aaKnown RBP15.32■□□□□ 0.04
SCARB2-221ENST00000640341 CPA2P48052 419 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 TGFB2P61812 414 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 IGBP1P78318 339 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 STXBP2Q15833 593 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 MDH1BQ5I0G3 518 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 FKBP1CQ5VVH2 108 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 C1orf228Q6PIY5 440 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 DLK2Q6UY11 383 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 CPT1BQ92523 772 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 VCPIP1Q96JH7 1222 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 FAM111AQ96PZ2 611 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 TEX13BQ9BXU2 312 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 FBXO6Q9NRD1 293 aaPredicted RBP15.32■□□□□ 0.04
SCARB2-221ENST00000640341 CENPFP49454 3210 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 CLUHO75153 1309 aa15.32■□□□□ 0.04
SCARB2-221ENST00000640341 RBP3P10745 1247 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 PCK1P35558 622 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 EIF3EP60228 445 aaKnown RBP15.31■□□□□ 0.04
SCARB2-221ENST00000640341 TLDC1Q6P9B6 456 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 KIAA0319LQ8IZA0 1049 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 PDIK1LQ8N165 341 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 UBA3Q8TBC4 463 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 CDHR1Q96JP9 859 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 NIF3L1Q9GZT8 377 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 PGAP2Q9UHJ9 254 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 SMG5Q9UPR3 1016 aaKnown RBP15.31■□□□□ 0.04
SCARB2-221ENST00000640341 STARD13Q9Y3M8 1113 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 HEY1Q9Y5J3 304 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 CCDC195A0A1B0GUA6 201 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 ALOX15BO15296 676 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 MAFGO15525 162 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 FAM155BO75949 473 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 TMEM63AO94886 807 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 MT-ND3P03897 115 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 PHBP35232 272 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 IRX4P78413 519 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 OASLQ15646 514 aaKnown RBP15.31■□□□□ 0.04
SCARB2-221ENST00000640341 DUOXA2Q1HG44 320 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 RAB6CQ53S08 254 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 PLEKHG4Q58EX7 1191 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 SH3PXD2AQ5TCZ1 1133 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 DARS2Q6PI48 645 aaKnown RBP15.31■□□□□ 0.04
SCARB2-221ENST00000640341 FAM13CQ8NE31 585 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 SPATA18Q8TC71 538 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 SPDL1Q96EA4 605 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 RAB6CQ9H0N0 254 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 STK32BQ9NY57 414 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 EURLQ9NYK6 297 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 B4GALT5O43286 388 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 LRCH4O75427 683 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 DCTN3O75935 186 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 ASS1P00966 412 aaKnown RBP15.31■□□□□ 0.04
SCARB2-221ENST00000640341 TROVE2P10155 538 aaKnown RBP eCLIP15.31■□□□□ 0.04
SCARB2-221ENST00000640341 KITP10721 976 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 STAT5BP51692 787 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 NR1H3Q13133 447 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 PIGHQ14442 188 aaPredicted RBP15.31■□□□□ 0.04
SCARB2-221ENST00000640341 LY6KQ17RY6 165 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 APBB1IPQ7Z5R6 666 aaPredicted RBP15.31■□□□□ 0.04
SCARB2-221ENST00000640341 SCYL3Q8IZE3 742 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 RIBC1Q8N443 379 aaPredicted RBP15.31■□□□□ 0.04
SCARB2-221ENST00000640341 ATP11CQ8NB49 1132 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 PTPRN2Q92932 1015 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 MAP3K20Q9NYL2 800 aaKnown RBP15.31■□□□□ 0.04
SCARB2-221ENST00000640341 ACTL7BQ9Y614 415 aa15.31■□□□□ 0.04
SCARB2-221ENST00000640341 H7C0C1 242 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 LPXNO60711 386 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 ATP5OP48047 213 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 BZW1Q7L1Q6 419 aaKnown RBP15.3■□□□□ 0.04
SCARB2-221ENST00000640341 TMEM192Q8IY95 271 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 DENND1AQ8TEH3 1009 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 SLC13A1Q9BZW2 595 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 PCDH9Q9HC56 1237 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 MARCOQ9UEW3 520 aaPredicted RBP15.3■□□□□ 0.04
SCARB2-221ENST00000640341 RABGEF1Q9UJ41 708 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 COL4A5P29400 1685 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 ABHD2P08910 425 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 CCDC6Q16204 474 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 HADHQ16836 314 aaKnown RBP15.3■□□□□ 0.04
SCARB2-221ENST00000640341 NCAPG2Q86XI2 1143 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 PPIL6Q8IXY8 311 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 DTX3LQ8TDB6 740 aa15.3■□□□□ 0.04
SCARB2-221ENST00000640341 PRR11Q96HE9 360 aaPredicted RBP15.3■□□□□ 0.04
SCARB2-221ENST00000640341 CPXM1Q96SM3 734 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms