RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 IFNA2P01563 188 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 ITGAVP06756 1048 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 HSPA5P11021 654 aaKnown RBP3.89□□□□□ -1.79
CCDC7-213ENST00000639290 DARSP14868 501 aaKnown RBP3.89□□□□□ -1.79
CCDC7-213ENST00000639290 GJA1P17302 382 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 EIF2AK2P19525 551 aaKnown RBP3.89□□□□□ -1.79
CCDC7-213ENST00000639290 CD6P30203 668 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 ELF1P32519 619 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 GJA4P35212 333 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 ZNF132P52740 706 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 USP46P62068 366 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 CYP4A11Q02928 519 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 ISXQ2M1V0 245 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 PODNL1Q6PEZ8 512 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 NLRX1Q86UT6 975 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 ZNF444Q8N0Y2 327 aaPredicted RBP3.89□□□□□ -1.79
CCDC7-213ENST00000639290 ZCCHC9Q8N567 271 aaKnown RBP3.89□□□□□ -1.79
CCDC7-213ENST00000639290 SHKBP1Q8TBC3 707 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 SAP25Q8TEE9 199 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 PDCD6IPQ8WUM4 868 aaKnown RBP3.89□□□□□ -1.79
CCDC7-213ENST00000639290 TCEAL4Q96EI5 215 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 AZI2Q9H6S1 392 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 BRPF3Q9ULD4 1205 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 ANKRD6Q9Y2G4 727 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 ANK2Q01484 3957 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 TCRBV21S2A2A0A5A6 115 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.89□□□□□ -1.79
CCDC7-213ENST00000639290 K7EQS6 105 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 MAFGO15525 162 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 SORBS2O94875 1100 aaKnown RBP3.89□□□□□ -1.79
CCDC7-213ENST00000639290 KRT19P08727 400 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 SFPQP23246 707 aaKnown RBP eCLIP3.89□□□□□ -1.79
CCDC7-213ENST00000639290 MAPK1P28482 360 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 SLC6A11P48066 632 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 RXRGP48443 463 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 G3BP1Q13283 466 aaKnown RBP eCLIP3.89□□□□□ -1.79
CCDC7-213ENST00000639290 LBRQ14739 615 aaKnown RBP3.89□□□□□ -1.79
CCDC7-213ENST00000639290 SWI5Q1ZZU3 235 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 KIF19Q2TAC6 998 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 GPR158Q5T848 1215 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 BRICD5Q6PL45 260 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 CYFIP1Q7L576 1253 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 TP53INP2Q8IXH6 220 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 CYP4X1Q8N118 509 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 ZNF461Q8TAF7 563 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 SMARCC2Q8TAQ2 1214 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 ATP2A3Q93084 1043 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 TMEM159Q96B96 161 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 GPRASP2Q96D09 838 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 CCDC51Q96ER9 411 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 NEUROD6Q96NK8 337 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 OSMRQ99650 979 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 METTL14Q9HCE5 456 aaKnown RBP3.89□□□□□ -1.79
CCDC7-213ENST00000639290 EDARQ9UNE0 448 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 SATB2Q9UPW6 733 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 INSL5Q9Y5Q6 135 aa3.89□□□□□ -1.79
CCDC7-213ENST00000639290 KNTC1P50748 2209 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 RTTNQ86VV8 2226 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 A0A1W2PQ27 194 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 A0A1W2PQ64 194 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 A0A1W2PQC6 194 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 GSTTP1A0A1W2PQM5 241 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 SFI1A8K8P3 1242 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 ZNF891A8MT65 544 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 F6X3S4 739 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 TMEM189-UBE2V1I3L0A0 370 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 M0R2C6 588 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 ADAMTS3O15072 1205 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 NVLO15381 856 aaKnown RBP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 RAB11FIP3O75154 756 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 IDH1O75874 414 aaKnown RBP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 CLSTN1O94985 981 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 MCCP23508 829 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 RBMXP38159 391 aaKnown RBP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 CCR2P41597 374 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 OR1G1P47890 313 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 TFCP2Q12800 502 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 FOXD4Q12950 439 aaPredicted RBP3.88□□□□□ -1.79
CCDC7-213ENST00000639290 PLCB4Q15147 1175 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 E2F5Q15329 346 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 TEAD2Q15562 447 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 SFMBT2Q5VUG0 894 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 JAKMIP3Q5VZ66 844 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 KIAA0895LQ68EN5 471 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 SLC8B1Q6J4K2 584 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 ANKS3Q6ZW76 656 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 NAGSQ8N159 534 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 EPS8L1Q8TE68 723 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 HTR3CQ8WXA8 447 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 HVCN1Q96D96 273 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 MAP7D2Q96T17 732 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 GBP3Q9H0R5 595 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 CDH19Q9H159 772 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 TASP1Q9H6P5 420 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 PTPRHQ9HD43 1115 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 NCKIPSDQ9NZQ3 722 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 CALCOCO1Q9P1Z2 691 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 DCTN4Q9UJW0 460 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 PPME1Q9Y570 386 aa3.88□□□□□ -1.79
CCDC7-213ENST00000639290 PCDHB11Q9Y5F2 797 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms