RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 HOXD13P35453 343 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 LHX1P48742 406 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 RPL10AP62906 217 aaKnown RBP18.09■□□□□ 0.49
SMN2-216ENST00000638794 RUNX3Q13761 415 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 SOWAHAQ2M3V2 549 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 LAIR1Q6GTX8 287 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 STXBP4Q6ZWJ1 553 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 MON1AQ86VX9 555 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 SYNPOQ8N3V7 929 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 OR5B17Q8NGF7 314 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 RIN3Q8TB24 985 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 CHFRQ96EP1 664 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 ANKRD36BP1Q96IX9 119 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 TRIM9Q9C026 710 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 EBF3Q9H4W6 596 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 KIF9Q9HAQ2 790 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 TDP1Q9NUW8 608 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 KBTBD4Q9NVX7 518 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 RALGAPA1Q6GYQ0 2036 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 PTPRDP23468 1912 aa18.09■□□□□ 0.49
SMN2-216ENST00000638794 SPTBN2O15020 2390 aa18.08■□□□□ 0.48
SMN2-216ENST00000638794 ZNF233A6NK53 670 aa18.08■□□□□ 0.48
SMN2-216ENST00000638794 SOBPA7XYQ1 873 aa18.08■□□□□ 0.48
SMN2-216ENST00000638794 HRO43593 1189 aa18.08■□□□□ 0.48
SMN2-216ENST00000638794 PCSK1P29120 753 aa18.08■□□□□ 0.48
SMN2-216ENST00000638794 LMNB2Q03252 620 aa18.08■□□□□ 0.48
SMN2-216ENST00000638794 MYO1EQ12965 1108 aa18.08■□□□□ 0.48
SMN2-216ENST00000638794 SRSF5Q13243 272 aaKnown RBP18.08■□□□□ 0.48
SMN2-216ENST00000638794 SIM2Q14190 667 aaPredicted RBP18.08■□□□□ 0.48
SMN2-216ENST00000638794 CFAP221Q4G0U5 840 aa18.08■□□□□ 0.48
SMN2-216ENST00000638794 HEATR6Q6AI08 1181 aaKnown RBP18.08■□□□□ 0.48
SMN2-216ENST00000638794 LONP2Q86WA8 852 aa18.08■□□□□ 0.48
SMN2-216ENST00000638794 SPATA2LQ8IUW3 424 aaPredicted RBP18.08■□□□□ 0.48
SMN2-216ENST00000638794 TRMT2BQ96GJ1 504 aaKnown RBP18.08■□□□□ 0.48
SMN2-216ENST00000638794 HPDLQ96IR7 371 aa18.08■□□□□ 0.48
SMN2-216ENST00000638794 MYRFLQ96LU7 910 aa18.08■□□□□ 0.48
SMN2-216ENST00000638794 BACH2Q9BYV9 841 aa18.08■□□□□ 0.48
SMN2-216ENST00000638794 LRRC27Q9C0I9 530 aa18.08■□□□□ 0.48
SMN2-216ENST00000638794 HSPBP1Q9NZL4 362 aa18.08■□□□□ 0.48
SMN2-216ENST00000638794 TFIP11Q9UBB9 837 aaKnown RBP18.08■□□□□ 0.48
SMN2-216ENST00000638794 UXTQ9UBK9 157 aaPredicted RBP18.08■□□□□ 0.48
SMN2-216ENST00000638794 PPP6R2O75170 966 aa18.07■□□□□ 0.48
SMN2-216ENST00000638794 TNNC2P02585 160 aa18.07■□□□□ 0.48
SMN2-216ENST00000638794 ARSAP15289 507 aa18.07■□□□□ 0.48
SMN2-216ENST00000638794 ASIC1P78348 528 aa18.07■□□□□ 0.48
SMN2-216ENST00000638794 SPEM2Q0P670 501 aa18.07■□□□□ 0.48
SMN2-216ENST00000638794 ZNF268Q14587 947 aaPredicted RBP18.07■□□□□ 0.48
SMN2-216ENST00000638794 PKN3Q6P5Z2 889 aa18.07■□□□□ 0.48
SMN2-216ENST00000638794 LIMS2Q7Z4I7 341 aa18.07■□□□□ 0.48
SMN2-216ENST00000638794 KBTBD7Q8WVZ9 684 aa18.07■□□□□ 0.48
SMN2-216ENST00000638794 DHX58Q96C10 678 aa18.07■□□□□ 0.48
SMN2-216ENST00000638794 FUBP3Q96I24 572 aaKnown RBP eCLIP18.07■□□□□ 0.48
SMN2-216ENST00000638794 CUEDC2Q9H467 287 aa18.07■□□□□ 0.48
SMN2-216ENST00000638794 TRPC7Q9HCX4 862 aa18.07■□□□□ 0.48
SMN2-216ENST00000638794 R3HCC1Q9Y3T6 440 aaKnown RBP18.07■□□□□ 0.48
SMN2-216ENST00000638794 HELZP42694 1942 aaKnown RBP18.07■□□□□ 0.48
SMN2-216ENST00000638794 PRR5-ARHGAP8B1AHC4 643 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 EIF3DO15371 548 aaKnown RBP eCLIP18.06■□□□□ 0.48
SMN2-216ENST00000638794 ATP2C2O75185 946 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 RETP07949 1114 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 LMO2P25791 158 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 CNR2P34972 360 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 PSMC1P62191 440 aaKnown RBP18.06■□□□□ 0.48
SMN2-216ENST00000638794 ARHGAP8P85298 464 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 SURF1Q15526 300 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 DUOXA2Q1HG44 320 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 TMEM196Q5HYL7 178 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 FSTL4Q6MZW2 842 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 CC2D1AQ6P1N0 951 aaPredicted RBP18.06■□□□□ 0.48
SMN2-216ENST00000638794 FAM171BQ6P995 826 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 EPM2AIP1Q7L775 607 aaPredicted RBP18.06■□□□□ 0.48
SMN2-216ENST00000638794 DPH6Q7L8W6 267 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 WDR49Q8IV35 697 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 SCN4BQ8IWT1 228 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 ZNF396Q96N95 335 aaPredicted RBP18.06■□□□□ 0.48
SMN2-216ENST00000638794 SLC22A12Q96S37 553 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 SYT15Q9BQS2 421 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 CDV3Q9UKY7 258 aaKnown RBP18.06■□□□□ 0.48
SMN2-216ENST00000638794 SPAG17Q6Q759 2223 aa18.06■□□□□ 0.48
SMN2-216ENST00000638794 TRDMT1O14717 391 aaKnown RBP18.05■□□□□ 0.48
SMN2-216ENST00000638794 TGFB1I1O43294 461 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 YEATS4O95619 227 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 SDHBP21912 280 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 HOXA6P31267 233 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 MAGEA11P43364 429 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 ATXN1P54253 815 aaKnown RBP18.05■□□□□ 0.48
SMN2-216ENST00000638794 AMPD3Q01432 767 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 FAM160A1Q05DH4 1040 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 GRSF1Q12849 480 aaKnown RBP eCLIP18.05■□□□□ 0.48
SMN2-216ENST00000638794 MTF1Q14872 753 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 SNRNP35Q16560 246 aaKnown RBP18.05■□□□□ 0.48
SMN2-216ENST00000638794 FAM26FQ5R3K3 315 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 CNNM4Q6P4Q7 775 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 SHC4Q6S5L8 630 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 C4orf50Q6ZRC1 276 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 IQUBQ8NA54 791 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 ZNF507Q8TCN5 953 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 MYLPFQ96A32 169 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 CYP2S1Q96SQ9 504 aa18.05■□□□□ 0.48
SMN2-216ENST00000638794 KIAA1586Q9HCI6 787 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms