RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 NIF3L1Q9GZT8 377 aa23.23■■□□□ 1.31
SCN1B-206ENST00000638536 KCNK12Q9HB15 430 aa23.23■■□□□ 1.31
SCN1B-206ENST00000638536 ASAH2Q9NR71 780 aa23.23■■□□□ 1.31
SCN1B-206ENST00000638536 MBD3O95983 291 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 CACNA2D1P54289 1103 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 GAREM2Q75VX8 874 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 ACOT1Q86TX2 421 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 WHAMMQ8TF30 809 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 B3GNT5Q9BYG0 378 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 ABCB6Q9NP58 842 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 MAGEC2Q9UBF1 373 aaPredicted RBP23.22■■□□□ 1.31
SCN1B-206ENST00000638536 P4HA1P13674 534 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 HMGA1P17096 107 aaKnown RBP23.22■■□□□ 1.31
SCN1B-206ENST00000638536 CD58P19256 250 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 KCNH2Q12809 1159 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 LRMPQ12912 555 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 PTPN21Q16825 1174 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 CYP4A22Q5TCH4 519 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 PAQR9Q6ZVX9 377 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 SHKBP1Q8TBC3 707 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 FAM200AQ8TCP9 573 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 FGF14Q92915 247 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 FUBP3Q96I24 572 aaKnown RBP eCLIP23.22■■□□□ 1.31
SCN1B-206ENST00000638536 CNOT6LQ96LI5 555 aaKnown RBP23.22■■□□□ 1.31
SCN1B-206ENST00000638536 ZSWIM3Q96MP5 696 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 ZNF518BQ9C0D4 1074 aa23.22■■□□□ 1.31
SCN1B-206ENST00000638536 A0A1W2PRU2 124 aa23.21■■□□□ 1.31
SCN1B-206ENST00000638536 GNA14O95837 355 aa23.21■■□□□ 1.31
SCN1B-206ENST00000638536 HSP90AA4PQ58FG1 418 aa23.21■■□□□ 1.31
SCN1B-206ENST00000638536 STXBP5Q5T5C0 1151 aa23.21■■□□□ 1.31
SCN1B-206ENST00000638536 PARM1Q6UWI2 310 aa23.21■■□□□ 1.31
SCN1B-206ENST00000638536 C4orf50Q6ZRC1 276 aa23.21■■□□□ 1.31
SCN1B-206ENST00000638536 CREBRFQ8IUR6 639 aa23.21■■□□□ 1.31
SCN1B-206ENST00000638536 SCN4BQ8IWT1 228 aa23.21■■□□□ 1.31
SCN1B-206ENST00000638536 C12orf29Q8N999 325 aa23.21■■□□□ 1.31
SCN1B-206ENST00000638536 LMO3Q8TAP4 145 aa23.21■■□□□ 1.31
SCN1B-206ENST00000638536 ANAPC1Q9H1A4 1944 aa23.21■■□□□ 1.31
SCN1B-206ENST00000638536 IL21Q9HBE4 155 aa23.21■■□□□ 1.31
SCN1B-206ENST00000638536 C11orf16Q9NQ32 467 aa23.21■■□□□ 1.31
SCN1B-206ENST00000638536 ASB3Q9Y575 518 aa23.21■■□□□ 1.31
SCN1B-206ENST00000638536 INCA1Q0VD86 236 aa23.2■■□□□ 1.3
SCN1B-206ENST00000638536 TEAD2Q15562 447 aa23.2■■□□□ 1.3
SCN1B-206ENST00000638536 FAM86C2PA6NEL3 165 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 ANHXE9PGG2 379 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 CCDC192P0DO97 292 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 MAPRE1Q15691 268 aaKnown RBP23.19■■□□□ 1.3
SCN1B-206ENST00000638536 CCDC183Q5T5S1 534 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 TMEM150AQ86TG1 271 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 CCDC150Q8NCX0 1101 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 ELOVL4Q9GZR5 314 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.19■■□□□ 1.3
SCN1B-206ENST00000638536 NUMBLQ9Y6R0 609 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 ZNF197O14709 1029 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 NARSO43776 548 aaKnown RBP23.19■■□□□ 1.3
SCN1B-206ENST00000638536 CILPO75339 1184 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 CCDC130P13994 396 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 GABRR2P28476 465 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 ERCC5P28715 1186 aaPredicted RBP23.19■■□□□ 1.3
SCN1B-206ENST00000638536 MAGEA11P43364 429 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 ZXDAP98168 799 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 HTR4Q13639 388 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 VEPH1Q14D04 833 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 ZNF394Q53GI3 561 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 WDR44Q5JSH3 913 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 C11orf57Q6ZUT1 292 aaPredicted RBP23.19■■□□□ 1.3
SCN1B-206ENST00000638536 ITIH5Q86UX2 942 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 CRYBG2Q8N1P7 616 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 CYP3A43Q9HB55 503 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 MAGED2Q9UNF1 606 aaPredicted RBP23.19■■□□□ 1.3
SCN1B-206ENST00000638536 SORCS3Q9UPU3 1222 aa23.19■■□□□ 1.3
SCN1B-206ENST00000638536 ZDBF2Q9HCK1 2354 aa23.18■■□□□ 1.3
SCN1B-206ENST00000638536 SLC38A8A6NNN8 435 aa23.18■■□□□ 1.3
SCN1B-206ENST00000638536 PMM2O15305 246 aa23.18■■□□□ 1.3
SCN1B-206ENST00000638536 FGFR1OPO95684 399 aaKnown RBP23.18■■□□□ 1.3
SCN1B-206ENST00000638536 ALADP13716 330 aa23.18■■□□□ 1.3
SCN1B-206ENST00000638536 GRIK1P39086 918 aa23.18■■□□□ 1.3
SCN1B-206ENST00000638536 UNC93AQ86WB7 457 aa23.18■■□□□ 1.3
SCN1B-206ENST00000638536 GPIHBP1Q8IV16 184 aa23.18■■□□□ 1.3
SCN1B-206ENST00000638536 FUKQ8N0W3 1084 aa23.18■■□□□ 1.3
SCN1B-206ENST00000638536 SLC44A3Q8N4M1 653 aa23.18■■□□□ 1.3
SCN1B-206ENST00000638536 CISHQ9NSE2 258 aa23.18■■□□□ 1.3
SCN1B-206ENST00000638536 SAMSN1Q9NSI8 373 aaKnown RBP23.18■■□□□ 1.3
SCN1B-206ENST00000638536 FAM49BQ9NUQ9 324 aa23.18■■□□□ 1.3
SCN1B-206ENST00000638536 F8VP50 259 aa23.17■■□□□ 1.3
SCN1B-206ENST00000638536 MICAL2O94851 1124 aa23.17■■□□□ 1.3
SCN1B-206ENST00000638536 AFPP02771 609 aaKnown RBP23.17■■□□□ 1.3
SCN1B-206ENST00000638536 RPL10AP62906 217 aaKnown RBP23.17■■□□□ 1.3
SCN1B-206ENST00000638536 CYP4F8P98187 520 aa23.17■■□□□ 1.3
SCN1B-206ENST00000638536 VSTM1Q6UX27 236 aa23.17■■□□□ 1.3
SCN1B-206ENST00000638536 LEMD2Q8NC56 503 aa23.17■■□□□ 1.3
SCN1B-206ENST00000638536 EDAQ92838 391 aa23.17■■□□□ 1.3
SCN1B-206ENST00000638536 KAT5Q92993 513 aa23.17■■□□□ 1.3
SCN1B-206ENST00000638536 TNIP3Q96KP6 325 aa23.17■■□□□ 1.3
SCN1B-206ENST00000638536 KCNK16Q96T55 309 aa23.17■■□□□ 1.3
SCN1B-206ENST00000638536 PLA2G2FQ9BZM2 168 aa23.17■■□□□ 1.3
SCN1B-206ENST00000638536 ATXN3LQ9H3M9 355 aa23.17■■□□□ 1.3
SCN1B-206ENST00000638536 DACH1Q9UI36 760 aa23.17■■□□□ 1.3
SCN1B-206ENST00000638536 ZFP37Q9Y6Q3 630 aaPredicted RBP23.17■■□□□ 1.3
SCN1B-206ENST00000638536 WDFY4Q6ZS81 3184 aa23.16■■□□□ 1.3
SCN1B-206ENST00000638536 F11P03951 625 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms