RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 TMEM114B3SHH9 223 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 SSNA1O43805 119 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 ASMTLO95671 621 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 SPON2Q9BUD6 331 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 FBXO40Q9UH90 709 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 POLG2Q9UHN1 485 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 PPP2R3BQ9Y5P8 575 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 NDUFB5O43674 189 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 CD2BP2O95400 341 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 ARF5P84085 180 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 ITGADQ13349 1161 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 ARMCX6Q7L4S7 300 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 HAUS6Q7Z4H7 955 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 SCUBE1Q8IWY4 988 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 ATG16L2Q8NAA4 619 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 STARD8Q92502 1023 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 SCP2P22307 547 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 CBX5P45973 191 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 PEX3P56589 373 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 FAM98BQ52LJ0 330 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 PID1Q7Z2X4 250 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 SAMD3Q8N6K7 520 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 ZNF594Q96JF6 807 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 ZNF112Q9UJU3 913 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 TMA7Q9Y2S6 64 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 PRAG1Q86YV5 1406 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 NEURL1BA8MQ27 555 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 MYL12BO14950 172 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 KPNA5O15131 536 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 KPNA6O60684 536 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 TRIM32Q13049 653 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 OTOAQ7RTW8 1153 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 FRMD5Q7Z6J6 570 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 CIAO1O76071 339 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 CMTR1Q8N1G2 835 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 SPATA4Q8NEY3 305 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 CENPIQ92674 756 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 PAGE5Q96GU1 130 aa20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-257ENST00000638009 FGFR4P22455 802 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 ITGB3BPQ13352 177 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 C18orf8Q96DM3 657 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 TRAPPC11Q7Z392 1133 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 SNRNP27Q8WVK2 155 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 RCOR1Q9UKL0 485 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 NCAPD2Q15021 1401 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 C2orf81A6NN90 581 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 SORBS3O60504 671 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 GYS1P13807 737 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 GALNT3Q14435 633 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 KCNV1Q6PIU1 500 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 RTKN2Q8IZC4 609 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 HS6ST3Q8IZP7 471 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 EXOSC10Q01780 885 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 PWP1Q13610 501 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 MTMR1Q13613 665 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 SAMSN1Q9NSI8 373 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 NEU2Q9Y3R4 380 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 RAD51BO15315 384 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 PRPF3O43395 683 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 ALG11Q2TAA5 492 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 C3orf62Q6ZUJ4 267 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 MGAT4DA6NG13 374 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 SKAP2O75563 359 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 SUZ12Q15022 739 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 R3HDM1Q15032 1099 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 KNOP1Q1ED39 458 aaKnown RBP20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 UBP1Q9NZI7 540 aa20.04■□□□□ 0.8
CACNA1A-257ENST00000638009 A0A1W2PQC6 194 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 LDOC1O95751 146 aaPredicted RBP20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 BTDP43251 543 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 KCNJ6P48051 423 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 CCDC144BQ3MJ40 725 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 POLR1BQ9H9Y6 1135 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 CCDC177Q9NQR7 707 aaPredicted RBP20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 RPS6KA5O75582 802 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 ITGA9Q13797 1035 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 PRKD2Q9BZL6 878 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 RSL24D1Q9UHA3 163 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 TCN1P20061 433 aaPredicted RBP20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 FAUP35544 74 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 ATP13A5Q4VNC0 1218 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 LINC00301Q8NCQ3 95 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 S100ZQ8WXG8 99 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 MIEF1Q9NQG6 463 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 LRRC14Q15048 493 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 ZNF284Q2VY69 593 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 FBXW10Q5XX13 1052 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 BARGINQ6ZT62 677 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 C1orf232A0A0U1RR37 186 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 AREL1O15033 823 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 GPC1P35052 558 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 GFPT1Q06210 699 aaPredicted RBP20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 AHSPQ9NZD4 102 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 TIMM44O43615 452 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 BICRALQ6AI39 1079 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 TMEM79Q9BSE2 394 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 MMADHCQ9H3L0 296 aaPredicted RBP20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 RAB6BQ9NRW1 208 aa20.03■□□□□ 0.8
CACNA1A-257ENST00000638009 BCLAF3A2AJT9 711 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms