RNA–Protein interactions for RNA: ENST00000637555.1

CNTNAP2-220, Transcript of contactin associated protein like 2, humanhuman

TSL 5

Gene CNTNAP2, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-220ENST00000637555 KRT19P08727 400 aa13.53□□□□□ -0.24
CNTNAP2-220ENST00000637555 TMEM253P0C7T8 217 aa13.53□□□□□ -0.24
CNTNAP2-220ENST00000637555 SYN1P17600 705 aa13.53□□□□□ -0.24
CNTNAP2-220ENST00000637555 WDR5P61964 334 aaKnown RBP13.53□□□□□ -0.24
CNTNAP2-220ENST00000637555 GCNT1Q02742 428 aa13.53□□□□□ -0.24
CNTNAP2-220ENST00000637555 ZNF699Q32M78 642 aa13.53□□□□□ -0.24
CNTNAP2-220ENST00000637555 NOMO2Q5JPE7 1267 aa13.53□□□□□ -0.24
CNTNAP2-220ENST00000637555 LRRC52Q8N7C0 313 aa13.53□□□□□ -0.24
CNTNAP2-220ENST00000637555 UBR7Q8N806 425 aa13.53□□□□□ -0.24
CNTNAP2-220ENST00000637555 RFFLQ8WZ73 363 aa13.53□□□□□ -0.24
CNTNAP2-220ENST00000637555 CALR3Q96L12 384 aaKnown RBP13.53□□□□□ -0.24
CNTNAP2-220ENST00000637555 CACNG4Q9UBN1 327 aa13.53□□□□□ -0.24
CNTNAP2-220ENST00000637555 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.53□□□□□ -0.24
CNTNAP2-220ENST00000637555 VWA8A3KMH1 1905 aa13.53□□□□□ -0.24
CNTNAP2-220ENST00000637555 NLRC5Q86WI3 1866 aa13.53□□□□□ -0.24
CNTNAP2-220ENST00000637555 ASPAP45381 313 aa13.52□□□□□ -0.24
CNTNAP2-220ENST00000637555 DEFB103AP81534 67 aa13.52□□□□□ -0.24
CNTNAP2-220ENST00000637555 DSC1Q08554 894 aa13.52□□□□□ -0.24
CNTNAP2-220ENST00000637555 WDR44Q5JSH3 913 aa13.52□□□□□ -0.24
CNTNAP2-220ENST00000637555 CEP85LQ5SZL2 805 aa13.52□□□□□ -0.24
CNTNAP2-220ENST00000637555 PPM1KQ8N3J5 372 aa13.52□□□□□ -0.24
CNTNAP2-220ENST00000637555 HPDLQ96IR7 371 aa13.52□□□□□ -0.24
CNTNAP2-220ENST00000637555 TRIM51Q9BSJ1 452 aa13.52□□□□□ -0.24
CNTNAP2-220ENST00000637555 TBC1D13Q9NVG8 400 aa13.52□□□□□ -0.24
CNTNAP2-220ENST00000637555 AMFRQ9UKV5 643 aa13.52□□□□□ -0.24
CNTNAP2-220ENST00000637555 LRFN2Q9ULH4 789 aa13.52□□□□□ -0.24
CNTNAP2-220ENST00000637555 ZMYND8Q9ULU4 1186 aaPredicted RBP13.52□□□□□ -0.24
CNTNAP2-220ENST00000637555 POLIQ9UNA4 740 aa13.52□□□□□ -0.24
CNTNAP2-220ENST00000637555 NCANO14594 1321 aa13.52□□□□□ -0.25
CNTNAP2-220ENST00000637555 EFCAB14O75071 495 aa13.52□□□□□ -0.25
CNTNAP2-220ENST00000637555 IGFBP6P24592 240 aaPredicted RBP13.52□□□□□ -0.25
CNTNAP2-220ENST00000637555 MAATS1Q7Z4T9 603 aa13.52□□□□□ -0.25
CNTNAP2-220ENST00000637555 CPNE8Q86YQ8 564 aa13.52□□□□□ -0.25
CNTNAP2-220ENST00000637555 TNS4Q8IZW8 715 aa13.52□□□□□ -0.25
CNTNAP2-220ENST00000637555 BCO2Q9BYV7 579 aa13.52□□□□□ -0.25
CNTNAP2-220ENST00000637555 IMPG2Q9BZV3 1241 aa13.52□□□□□ -0.25
CNTNAP2-220ENST00000637555 TRIM31Q9BZY9 425 aa13.52□□□□□ -0.25
CNTNAP2-220ENST00000637555 DPH5Q9H2P9 285 aa13.52□□□□□ -0.25
CNTNAP2-220ENST00000637555 HOXA2O43364 376 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 DDHD2O94830 711 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 TNFAIP3P21580 790 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 MARCKSL1P49006 195 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 TUSC3Q13454 348 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 CUL2Q13617 745 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 TMEM240Q5SV17 173 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 CD300LGQ6UXG3 332 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 ZNF365Q70YC5 407 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 ZNF280BQ86YH2 543 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 SYCE1Q8N0S2 351 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 URGCPQ8TCY9 931 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 CTNNBL1Q8WYA6 563 aaPredicted RBP13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 SHC3Q92529 594 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 TOP1MTQ969P6 601 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 FAXDC2Q96IV6 333 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 PCDHB18PQ96TA0 734 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 AGPAT1Q99943 283 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 PAAF1Q9BRP4 392 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 NIF3L1Q9GZT8 377 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 RC3H2Q9HBD1 1191 aaKnown RBP13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 SPTLC1O15269 473 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 DGKIO75912 1065 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 ACO1P21399 889 aaKnown RBP13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 CLCNKBP51801 687 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 MFAP3P55082 362 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 CORO7P57737 925 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 UPP1Q16831 310 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 ENOSF1Q7L5Y1 443 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 ZDHHC14Q8IZN3 488 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 C3orf58Q8NDZ4 430 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 KRT35Q92764 455 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 ATP6V1G3Q96LB4 118 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 SDCBP2Q9H190 292 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 RASSF4Q9H2L5 321 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 CENPHQ9H3R5 247 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 KANSL3Q9P2N6 904 aa13.51□□□□□ -0.25
CNTNAP2-220ENST00000637555 ATP8B3O60423 1300 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 CASTOR2A6NHX0 329 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 PODXLO00592 558 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 FGBP02675 491 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 FTLP02792 175 aaPredicted RBP13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 AMHP03971 560 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 TBXAS1P24557 533 aaPredicted RBP13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 RPL9P32969 192 aaKnown RBP13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 ZNF844Q08AG5 666 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 CUL1Q13616 776 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 ZNF667Q5HYK9 610 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 KDM7AQ6ZMT4 941 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 OTOP2Q7RTS6 562 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 COLGALT2Q8IYK4 626 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 RSPH1Q8WYR4 309 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 ZNF689Q96CS4 500 aaPredicted RBP13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 FAM81BQ96LP2 452 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 ZNF560Q96MR9 790 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 UROC1Q96N76 676 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 TMBIM4Q9HC24 238 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 ATMINO43313 823 aaPredicted RBP13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 NR1D1P20393 614 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 PNPLA4P41247 253 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 SEC24CP53992 1094 aa13.5□□□□□ -0.25
CNTNAP2-220ENST00000637555 WDR72Q3MJ13 1102 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms