RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 TASP1Q9H6P5 420 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 TRPV4Q9HBA0 871 aa14.76□□□□□ -0.05
PNKP-228ENST00000637325 KANSL1LA0AUZ9 987 aa14.75□□□□□ -0.05
PNKP-228ENST00000637325 TACC1O75410 805 aa14.75□□□□□ -0.05
PNKP-228ENST00000637325 C4BPAP04003 597 aaKnown RBP14.75□□□□□ -0.05
PNKP-228ENST00000637325 DCNP07585 359 aaKnown RBP14.75□□□□□ -0.05
PNKP-228ENST00000637325 KRT13P13646 458 aa14.75□□□□□ -0.05
PNKP-228ENST00000637325 DLG4P78352 724 aa14.75□□□□□ -0.05
PNKP-228ENST00000637325 ADAM9Q13443 819 aa14.75□□□□□ -0.05
PNKP-228ENST00000637325 UBXN2BQ14CS0 331 aa14.75□□□□□ -0.05
PNKP-228ENST00000637325 NFIL3Q16649 462 aa14.75□□□□□ -0.05
PNKP-228ENST00000637325 CFAP221Q4G0U5 840 aa14.75□□□□□ -0.05
PNKP-228ENST00000637325 TPRG1Q6ZUI0 275 aa14.75□□□□□ -0.05
PNKP-228ENST00000637325 CCDC105Q8IYK2 499 aa14.75□□□□□ -0.05
PNKP-228ENST00000637325 DNASE1L2Q92874 299 aa14.75□□□□□ -0.05
PNKP-228ENST00000637325 MYLPFQ96A32 169 aa14.75□□□□□ -0.05
PNKP-228ENST00000637325 FOXQ1Q9C009 403 aa14.75□□□□□ -0.05
PNKP-228ENST00000637325 IL21Q9HBE4 155 aa14.75□□□□□ -0.05
PNKP-228ENST00000637325 UXTQ9UBK9 157 aaPredicted RBP14.75□□□□□ -0.05
PNKP-228ENST00000637325 ZMYM5Q9UJ78 669 aa14.75□□□□□ -0.05
PNKP-228ENST00000637325 ATG2BQ96BY7 2078 aa14.75□□□□□ -0.05
PNKP-228ENST00000637325 SLC38A8A6NNN8 435 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 A8MXQ7 604 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 IKBKBO14920 756 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 P4HA1P13674 534 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 HMGA1P17096 107 aaKnown RBP14.74□□□□□ -0.05
PNKP-228ENST00000637325 BDNFP23560 247 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 ANXA13P27216 316 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 PSMC2P35998 433 aaKnown RBP14.74□□□□□ -0.05
PNKP-228ENST00000637325 GRIK1P39086 918 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 MAGEA11P43364 429 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 VAMP7P51809 220 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 NLRP12P59046 1061 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 CLDN10P78369 228 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 CCDC142Q17RM4 750 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 SGSM1Q2NKQ1 1148 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 MDH1BQ5I0G3 518 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 INTS8Q75QN2 995 aaKnown RBP14.74□□□□□ -0.05
PNKP-228ENST00000637325 ALYREFQ86V81 257 aaKnown RBP14.74□□□□□ -0.05
PNKP-228ENST00000637325 FAM186BQ8IYM0 893 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 SMYD4Q8IYR2 804 aaPredicted RBP14.74□□□□□ -0.05
PNKP-228ENST00000637325 STKLD1Q8NE28 680 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 ENGASEQ8NFI3 743 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 PJA1Q8NG27 643 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 MYCBPAPQ8TBZ2 947 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 CSGALNACT1Q8TDX6 532 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 MRPS31Q92665 395 aaKnown RBP14.74□□□□□ -0.05
PNKP-228ENST00000637325 SMARCE1Q969G3 411 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 GSDMAQ96QA5 445 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 XYLT2Q9H1B5 865 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 CRTAC1Q9NQ79 661 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 HEBP1Q9NRV9 189 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 FAM86C1Q9NVL1 165 aa14.74□□□□□ -0.05
PNKP-228ENST00000637325 MRPS17Q9Y2R5 130 aaKnown RBP14.74□□□□□ -0.05
PNKP-228ENST00000637325 FAM170BA6NMN3 283 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 MAPK13O15264 365 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 F11P03951 625 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 PTPN1P18031 435 aaKnown RBP14.73□□□□□ -0.05
PNKP-228ENST00000637325 DDX6P26196 483 aaKnown RBP eCLIP14.73□□□□□ -0.05
PNKP-228ENST00000637325 AVPR1AP37288 418 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 PIK3CAP42336 1068 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 ZACNQ401N2 412 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 VSTM1Q6UX27 236 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 SCARA5Q6ZMJ2 495 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 ZNF852Q6ZMS4 543 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 SV2AQ7L0J3 742 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 MAB21L3Q8N8X9 362 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 PCED1BQ96HM7 432 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 TIGD1Q96MW7 591 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 NELL2Q99435 816 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 TSG101Q99816 390 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 MKNK1Q9BUB5 465 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 SMYD3Q9H7B4 428 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 MMRN2Q9H8L6 949 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 VRTNQ9H8Y1 702 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 CIZ1Q9ULV3 898 aaPredicted RBP14.73□□□□□ -0.05
PNKP-228ENST00000637325 COL4A3Q01955 1670 aa14.73□□□□□ -0.05
PNKP-228ENST00000637325 HELZP42694 1942 aaKnown RBP14.72□□□□□ -0.05
PNKP-228ENST00000637325 MAN2B1O00754 1011 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 TRIM66O15016 1216 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 CETN3O15182 167 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 CHADO15335 359 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 NCAM2O15394 837 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 KINO60870 393 aaKnown RBP14.72□□□□□ -0.05
PNKP-228ENST00000637325 AKAP3O75969 853 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 NOL4O94818 638 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 VNN1O95497 513 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 CD72P21854 359 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 WEE1P30291 646 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 RAP1GAPP47736 663 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 CDH8P55286 799 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 ANGPT1Q15389 498 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 EDRF1Q3B7T1 1238 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 ZNF658Q5TYW1 1059 aaPredicted RBP14.72□□□□□ -0.05
PNKP-228ENST00000637325 CMTM8Q8IZV2 173 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 CELF5Q8N6W0 485 aaKnown RBP14.72□□□□□ -0.05
PNKP-228ENST00000637325 TAF4BQ92750 862 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 RSPRY1Q96DX4 576 aa14.72□□□□□ -0.05
PNKP-228ENST00000637325 DDX23Q9BUQ8 820 aaKnown RBP14.72□□□□□ -0.05
PNKP-228ENST00000637325 SLC46A2Q9BY10 475 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms