RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 VPS45Q9NRW7 570 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 GDAP2Q9NXN4 497 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 ITGA11Q9UKX5 1188 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 R3HCC1Q9Y3T6 440 aaKnown RBP19.59■□□□□ 0.73
CTSD-209ENST00000637158 TRAV19A0A0A6YYK7 116 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 TULP1O00294 542 aaPredicted RBP19.58■□□□□ 0.72
CTSD-209ENST00000637158 RHOBTB1O94844 696 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 EGFP01133 1207 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 PCSK1P29120 753 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 GJA4P35212 333 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 PDE6CP51160 858 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 ALCAMQ13740 583 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 SF3A2Q15428 464 aaKnown RBP19.58■□□□□ 0.72
CTSD-209ENST00000637158 DDR2Q16832 855 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 INTS6LQ5JSJ4 861 aaKnown RBP19.58■□□□□ 0.72
CTSD-209ENST00000637158 PLA2G2CQ5R387 149 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 SYT13Q7L8C5 426 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 CSGALNACT2Q8N6G5 542 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 TOP6BLQ8N6T0 577 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 C1orf127Q8N9H9 656 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 DUS2Q9NX74 493 aaKnown RBP19.58■□□□□ 0.72
CTSD-209ENST00000637158 RBAKQ9NYW8 714 aaPredicted RBP19.58■□□□□ 0.72
CTSD-209ENST00000637158 EBF1Q9UH73 591 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 ANGPTL2Q9UKU9 493 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 L1RE1Q9UN81 338 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 LAMA1P25391 3075 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 ANK1P16157 1881 aa19.58■□□□□ 0.72
CTSD-209ENST00000637158 TCHHQ07283 1943 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 KIF26AQ9ULI4 1882 aaPredicted RBP19.57■□□□□ 0.72
CTSD-209ENST00000637158 CKMP06732 381 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 ARSAP15289 507 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 KCNA4P22459 653 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 CYP2F1P24903 491 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 IFNAR2P48551 515 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 RBP5P82980 135 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 ELF2Q15723 593 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 STPG1Q5TH74 334 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 RRAGBQ5VZM2 374 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 DPH6Q7L8W6 267 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 C11orf74Q86VG3 221 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 SPATA2LQ8IUW3 424 aaPredicted RBP19.57■□□□□ 0.72
CTSD-209ENST00000637158 SYCP3Q8IZU3 236 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 CD101Q93033 1021 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 CHFRQ96EP1 664 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 EPSTI1Q96J88 318 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 CEP295NLQ96MC4 621 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 TRPC7Q9HCX4 862 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 OLFML3Q9NRN5 406 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 GTF3C4Q9UKN8 822 aa19.57■□□□□ 0.72
CTSD-209ENST00000637158 CNOT1A5YKK6 2376 aaKnown RBP19.56■□□□□ 0.72
CTSD-209ENST00000637158 TM4SF5O14894 197 aa19.56■□□□□ 0.72
CTSD-209ENST00000637158 KIAA0391O15091 583 aaKnown RBP19.56■□□□□ 0.72
CTSD-209ENST00000637158 GCNT3O95395 438 aa19.56■□□□□ 0.72
CTSD-209ENST00000637158 APBB3O95704 486 aa19.56■□□□□ 0.72
CTSD-209ENST00000637158 HOXC13P31276 330 aa19.56■□□□□ 0.72
CTSD-209ENST00000637158 MPLP40238 635 aa19.56■□□□□ 0.72
CTSD-209ENST00000637158 GPR15P49685 360 aa19.56■□□□□ 0.72
CTSD-209ENST00000637158 MYO1EQ12965 1108 aa19.56■□□□□ 0.72
CTSD-209ENST00000637158 ZNF77Q15935 545 aa19.56■□□□□ 0.72
CTSD-209ENST00000637158 PLK5Q496M5 336 aa19.56■□□□□ 0.72
CTSD-209ENST00000637158 C4orf50Q6ZRC1 276 aa19.56■□□□□ 0.72
CTSD-209ENST00000637158 RPLP0P6Q8NHW5 317 aa19.56■□□□□ 0.72
CTSD-209ENST00000637158 FBRSL1Q9HCM7 1045 aaKnown RBP19.56■□□□□ 0.72
CTSD-209ENST00000637158 EHD2Q9NZN4 543 aa19.56■□□□□ 0.72
CTSD-209ENST00000637158 SNX9Q9Y5X1 595 aa19.56■□□□□ 0.72
CTSD-209ENST00000637158 GREB1Q4ZG55 1949 aa19.56■□□□□ 0.72
CTSD-209ENST00000637158 ZFHX4Q86UP3 3567 aa19.56■□□□□ 0.72
CTSD-209ENST00000637158 KRT19P08727 400 aa19.55■□□□□ 0.72
CTSD-209ENST00000637158 TMEM191BP0C7N4 346 aa19.55■□□□□ 0.72
CTSD-209ENST00000637158 TCF3P15923 654 aa19.55■□□□□ 0.72
CTSD-209ENST00000637158 PFKLP17858 780 aa19.55■□□□□ 0.72
CTSD-209ENST00000637158 PDCP20941 246 aa19.55■□□□□ 0.72
CTSD-209ENST00000637158 ACAT1P24752 427 aaKnown RBP19.55■□□□□ 0.72
CTSD-209ENST00000637158 MAGEA11P43364 429 aa19.55■□□□□ 0.72
CTSD-209ENST00000637158 MAPRE1Q15691 268 aaKnown RBP19.55■□□□□ 0.72
CTSD-209ENST00000637158 SDHAF4Q5VUM1 108 aa19.55■□□□□ 0.72
CTSD-209ENST00000637158 CCDC73Q6ZRK6 1079 aa19.55■□□□□ 0.72
CTSD-209ENST00000637158 ADGRF2Q8IZF7 708 aa19.55■□□□□ 0.72
CTSD-209ENST00000637158 SAAL1Q96ER3 474 aa19.55■□□□□ 0.72
CTSD-209ENST00000637158 PKMYT1Q99640 499 aa19.55■□□□□ 0.72
CTSD-209ENST00000637158 SRPRBQ9Y5M8 271 aaKnown RBP19.55■□□□□ 0.72
CTSD-209ENST00000637158 SPAG17Q6Q759 2223 aa19.55■□□□□ 0.72
CTSD-209ENST00000637158 SDK1Q7Z5N4 2213 aa19.55■□□□□ 0.72
CTSD-209ENST00000637158 DENND4CQ5VZ89 1909 aa19.55■□□□□ 0.72
CTSD-209ENST00000637158 ZNF638Q14966 1978 aaKnown RBP19.54■□□□□ 0.72
CTSD-209ENST00000637158 MYMKA6NI61 221 aa19.54■□□□□ 0.72
CTSD-209ENST00000637158 GABRDO14764 452 aa19.54■□□□□ 0.72
CTSD-209ENST00000637158 TADA3O75528 432 aa19.54■□□□□ 0.72
CTSD-209ENST00000637158 SHC2P98077 582 aa19.54■□□□□ 0.72
CTSD-209ENST00000637158 KCNA1Q09470 495 aa19.54■□□□□ 0.72
CTSD-209ENST00000637158 DMC1Q14565 340 aa19.54■□□□□ 0.72
CTSD-209ENST00000637158 KCNB1Q14721 858 aa19.54■□□□□ 0.72
CTSD-209ENST00000637158 SURF1Q15526 300 aa19.54■□□□□ 0.72
CTSD-209ENST00000637158 CCDC6Q16204 474 aa19.54■□□□□ 0.72
CTSD-209ENST00000637158 EML3Q32P44 896 aa19.54■□□□□ 0.72
CTSD-209ENST00000637158 VSTM1Q6UX27 236 aa19.54■□□□□ 0.72
CTSD-209ENST00000637158 RIN3Q8TB24 985 aa19.54■□□□□ 0.72
CTSD-209ENST00000637158 DNAJC19Q96DA6 116 aa19.54■□□□□ 0.72
CTSD-209ENST00000637158 ANKRD36BP1Q96IX9 119 aa19.54■□□□□ 0.72
CTSD-209ENST00000637158 HHIPQ96QV1 700 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms