RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 ANKDD1AQ495B1 522 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 SMUG1Q53HV7 270 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 COBLL1Q53SF7 1204 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 WDR45BQ5MNZ6 344 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 RARS2Q5T160 578 aaKnown RBP4.21□□□□□ -1.74
CHD2-225ENST00000636861 ZFYVE27Q5T4F4 411 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 KIAA0319Q5VV43 1072 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 METTL21CQ5VZV1 264 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 SNRNP48Q6IEG0 339 aaKnown RBP4.21□□□□□ -1.74
CHD2-225ENST00000636861 TYW1BQ6NUM6 668 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 KLHDC10Q6PID8 442 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 SYDE1Q6ZW31 735 aaPredicted RBP4.21□□□□□ -1.74
CHD2-225ENST00000636861 MAEAQ7L5Y9 396 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 ARPINQ7Z6K5 226 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 DHDDSQ86SQ9 333 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 ZNF589Q86UQ0 364 aaPredicted RBP4.21□□□□□ -1.74
CHD2-225ENST00000636861 ITIH5Q86UX2 942 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 SATL1Q86VE3 508 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 LRRC6Q86X45 466 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 ECHDC2Q86YB7 292 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 PDSS2Q86YH6 399 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 MCF2L2Q86YR7 1114 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 TMPRSS6Q8IU80 811 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 FOXP4Q8IVH2 680 aaPredicted RBP4.21□□□□□ -1.74
CHD2-225ENST00000636861 ZSCAN29Q8IWY8 852 aaPredicted RBP4.21□□□□□ -1.74
CHD2-225ENST00000636861 SCYL3Q8IZE3 742 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 IFNL2Q8IZJ0 200 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 SPARTQ8N0X7 666 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 RASGEF1CQ8N431 466 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 MARVELD2Q8N4S9 558 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 AFAP1L2Q8N4X5 818 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 KBTBD3Q8NAB2 608 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 SUPT20HQ8NEM7 779 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 PDZD8Q8NEN9 1154 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 OR7G1Q8NGA0 311 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 RAB3IL1Q8TBN0 382 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 MDM1Q8TC05 714 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 EDAQ92838 391 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 UTP4Q969X6 686 aaKnown RBP4.21□□□□□ -1.74
CHD2-225ENST00000636861 CFAP36Q96G28 342 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 NSL1Q96IY1 281 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 CEP63Q96MT8 703 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 C7orf26Q96N11 449 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 TSG101Q99816 390 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 CTRCQ99895 268 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 AIFM2Q9BRQ8 373 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 GPATCH1Q9BRR8 931 aaKnown RBP4.21□□□□□ -1.74
CHD2-225ENST00000636861 ERP44Q9BS26 406 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 TXLNGYQ9BZA5 131 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 FOXP3Q9BZS1 431 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 KIAA1683Q9H0B3 1180 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 FAM96AQ9H5X1 160 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 MLXIPQ9HAP2 919 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 USP29Q9HBJ7 922 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 NCOA5Q9HCD5 579 aaKnown RBP4.21□□□□□ -1.74
CHD2-225ENST00000636861 ZNF304Q9HCX3 659 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 KCNK9Q9NPC2 374 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 RRN3Q9NYV6 651 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 C9orf78Q9NZ63 289 aaPredicted RBP4.21□□□□□ -1.74
CHD2-225ENST00000636861 CLIC5Q9NZA1 410 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 CEP72Q9P209 647 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 CHPF2Q9P2E5 772 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 IGSF9Q9P2J2 1179 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 ANKFY1Q9P2R3 1169 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 LGALS13Q9UHV8 139 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 ATPIF1Q9UII2 106 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 HAO1Q9UJM8 370 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 PNMA3Q9UL41 463 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 PHTF1Q9UMS5 762 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 ERVK-11Q9UQG0 969 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 ZNF652Q9Y2D9 606 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 MTO1Q9Y2Z2 717 aaKnown RBP4.21□□□□□ -1.74
CHD2-225ENST00000636861 IFT52Q9Y366 437 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 PHIPQ8WWQ0 1821 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 MAST3O60307 1309 aa4.21□□□□□ -1.74
CHD2-225ENST00000636861 LRBAP50851 2863 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 PABPN1LA6NDY0 278 aaKnown RBP4.2□□□□□ -1.74
CHD2-225ENST00000636861 GRXCR2A6NFK2 248 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 FAM47DPA6NHR8 397 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 A6NJR5 290 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 MIF4GDA9UHW6 222 aaKnown RBP4.2□□□□□ -1.74
CHD2-225ENST00000636861 C1QTNF9BB2RNN3 333 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 BTBD18B2RXH4 712 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 TXNDC9O14530 226 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 RGS13O14921 159 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 SPTLC1O15269 473 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 PRPF4O43172 522 aaKnown RBP eCLIP4.2□□□□□ -1.74
CHD2-225ENST00000636861 DAPK3O43293 454 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 ZBTB43O43298 467 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 RIPK2O43353 540 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 DENRO43583 198 aaKnown RBP4.2□□□□□ -1.74
CHD2-225ENST00000636861 SH3BP5O60239 455 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 SNX2O60749 519 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 EDF1O60869 148 aaKnown RBP4.2□□□□□ -1.74
CHD2-225ENST00000636861 DNAJC6O75061 913 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 TBX10O75333 385 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 UFL1O94874 794 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 FKBP9O95302 570 aa4.2□□□□□ -1.74
CHD2-225ENST00000636861 PDGFBP01127 241 aaPredicted RBP4.2□□□□□ -1.74
CHD2-225ENST00000636861 A1BGP04217 495 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms