RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 OATP04181 439 aa15.28■□□□□ 0.04
CLN6-215ENST00000636674 KRT4P19013 534 aa15.28■□□□□ 0.04
CLN6-215ENST00000636674 RNASELQ05823 741 aaKnown RBP15.28■□□□□ 0.04
CLN6-215ENST00000636674 GNPTABQ3T906 1256 aa15.28■□□□□ 0.04
CLN6-215ENST00000636674 BBS12Q6ZW61 710 aa15.28■□□□□ 0.04
CLN6-215ENST00000636674 NLRP9Q7RTR0 991 aa15.28■□□□□ 0.04
CLN6-215ENST00000636674 FNIP1Q8TF40 1166 aa15.28■□□□□ 0.04
CLN6-215ENST00000636674 CPT1BQ92523 772 aa15.28■□□□□ 0.04
CLN6-215ENST00000636674 FAXDC2Q96IV6 333 aa15.28■□□□□ 0.04
CLN6-215ENST00000636674 TBC1D10AQ9BXI6 508 aa15.28■□□□□ 0.04
CLN6-215ENST00000636674 VPS11Q9H270 941 aa15.28■□□□□ 0.04
CLN6-215ENST00000636674 FBXO40Q9UH90 709 aa15.28■□□□□ 0.04
CLN6-215ENST00000636674 STRIP2Q9ULQ0 834 aa15.28■□□□□ 0.04
CLN6-215ENST00000636674 EDN1P05305 212 aa15.27■□□□□ 0.04
CLN6-215ENST00000636674 ATP4AP20648 1035 aa15.27■□□□□ 0.04
CLN6-215ENST00000636674 PTPN4P29074 926 aa15.27■□□□□ 0.04
CLN6-215ENST00000636674 CTCFP49711 727 aaPredicted RBP15.27■□□□□ 0.04
CLN6-215ENST00000636674 SLC25A11Q02978 314 aaKnown RBP15.27■□□□□ 0.04
CLN6-215ENST00000636674 CTC1Q2NKJ3 1217 aa15.27■□□□□ 0.04
CLN6-215ENST00000636674 ZPBP2Q6X784 338 aa15.27■□□□□ 0.04
CLN6-215ENST00000636674 TMEM143Q96AN5 459 aa15.27■□□□□ 0.04
CLN6-215ENST00000636674 WNK4Q96J92 1243 aa15.27■□□□□ 0.04
CLN6-215ENST00000636674 PAFAH2Q99487 392 aa15.27■□□□□ 0.04
CLN6-215ENST00000636674 TRIM6Q9C030 488 aaPredicted RBP15.27■□□□□ 0.04
CLN6-215ENST00000636674 NIF3L1Q9GZT8 377 aa15.27■□□□□ 0.04
CLN6-215ENST00000636674 ANKFY1Q9P2R3 1169 aa15.27■□□□□ 0.04
CLN6-215ENST00000636674 LRRC42Q9Y546 428 aa15.27■□□□□ 0.04
CLN6-215ENST00000636674 LRRIQ4A6NIV6 560 aa15.27■□□□□ 0.03
CLN6-215ENST00000636674 FAM189A1O60320 539 aa15.27■□□□□ 0.03
CLN6-215ENST00000636674 TPBGLP0DKB5 382 aa15.27■□□□□ 0.03
CLN6-215ENST00000636674 TROVE2P10155 538 aaKnown RBP eCLIP15.27■□□□□ 0.03
CLN6-215ENST00000636674 CBLBQ13191 982 aa15.27■□□□□ 0.03
CLN6-215ENST00000636674 BLMHQ13867 455 aa15.27■□□□□ 0.03
CLN6-215ENST00000636674 HP1BP3Q5SSJ5 553 aaPredicted RBP15.27■□□□□ 0.03
CLN6-215ENST00000636674 WDTC1Q8N5D0 677 aa15.27■□□□□ 0.03
CLN6-215ENST00000636674 BANPQ8N9N5 519 aa15.27■□□□□ 0.03
CLN6-215ENST00000636674 PYROXD1Q8WU10 500 aa15.27■□□□□ 0.03
CLN6-215ENST00000636674 WDR83Q9BRX9 315 aaKnown RBP15.27■□□□□ 0.03
CLN6-215ENST00000636674 NIFKQ9BYG3 293 aaKnown RBP15.27■□□□□ 0.03
CLN6-215ENST00000636674 ZFP69BQ9UJL9 534 aa15.27■□□□□ 0.03
CLN6-215ENST00000636674 ADAMTS5Q9UNA0 930 aa15.27■□□□□ 0.03
CLN6-215ENST00000636674 SMNDC1O75940 238 aaKnown RBP eCLIP15.26■□□□□ 0.03
CLN6-215ENST00000636674 IL1BP01584 269 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 KRT7P08729 469 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 BRD2P25440 801 aaKnown RBP15.26■□□□□ 0.03
CLN6-215ENST00000636674 RFC5P40937 340 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 OTUD4Q01804 1114 aaKnown RBP15.26■□□□□ 0.03
CLN6-215ENST00000636674 TNFAIP1Q13829 316 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 TFDP1Q14186 410 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 MAPK6Q16659 721 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 CIAPIN1Q6FI81 312 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 SNRNP48Q6IEG0 339 aaKnown RBP15.26■□□□□ 0.03
CLN6-215ENST00000636674 GPAT2Q6NUI2 795 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 CLNKQ7Z7G1 428 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 CHSY1Q86X52 802 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 THNSL1Q8IYQ7 743 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 ACTL9Q8TC94 416 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 DCAKDQ8WVC6 231 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 HAUS1Q96CS2 278 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 ZNF277Q9NRM2 450 aaPredicted RBP15.26■□□□□ 0.03
CLN6-215ENST00000636674 NKX1-2Q9UD57 310 aaPredicted RBP15.26■□□□□ 0.03
CLN6-215ENST00000636674 ZNF214Q9UL59 606 aaPredicted RBP15.26■□□□□ 0.03
CLN6-215ENST00000636674 IFNB1P01574 187 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 LMNAP02545 664 aaKnown RBP15.26■□□□□ 0.03
CLN6-215ENST00000636674 GM2AP17900 193 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 ADRA1DP25100 572 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 ICAM3P32942 547 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 MSS51Q4VC12 460 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 TAF1BQ53T94 588 aaPredicted RBP15.26■□□□□ 0.03
CLN6-215ENST00000636674 ANKRD22Q5VYY1 191 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 CAPN12Q6ZSI9 719 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 LONP2Q86WA8 852 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 ANKMY2Q8IV38 441 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 TEX9Q8N6V9 391 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 SLC7A3Q8WY07 619 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 NAF1Q96HR8 494 aaKnown RBP15.26■□□□□ 0.03
CLN6-215ENST00000636674 TUBB6Q9BUF5 446 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 MYOZ2Q9NPC6 264 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 ZNF302Q9NR11 478 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 CISHQ9NSE2 258 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 KANSL3Q9P2N6 904 aa15.26■□□□□ 0.03
CLN6-215ENST00000636674 IGKV6D-21A0A0A0MT36 114 aa15.25■□□□□ 0.03
CLN6-215ENST00000636674 SIGLEC16A6NMB1 481 aa15.25■□□□□ 0.03
CLN6-215ENST00000636674 ADCY3O60266 1144 aa15.25■□□□□ 0.03
CLN6-215ENST00000636674 BANF1O75531 89 aa15.25■□□□□ 0.03
CLN6-215ENST00000636674 CBX6O95503 412 aa15.25■□□□□ 0.03
CLN6-215ENST00000636674 DHRS4L1P0CG22 281 aa15.25■□□□□ 0.03
CLN6-215ENST00000636674 EPHB2P29323 1055 aa15.25■□□□□ 0.03
CLN6-215ENST00000636674 SSTR1P30872 391 aa15.25■□□□□ 0.03
CLN6-215ENST00000636674 GDF10P55107 478 aa15.25■□□□□ 0.03
CLN6-215ENST00000636674 PLCB3Q01970 1234 aa15.25■□□□□ 0.03
CLN6-215ENST00000636674 SP4Q02446 784 aa15.25■□□□□ 0.03
CLN6-215ENST00000636674 EFTUD2Q15029 972 aaKnown RBP eCLIP15.25■□□□□ 0.03
CLN6-215ENST00000636674 TAF11Q15544 211 aa15.25■□□□□ 0.03
CLN6-215ENST00000636674 PLEKHG4Q58EX7 1191 aa15.25■□□□□ 0.03
CLN6-215ENST00000636674 FNBP1LQ5T0N5 605 aa15.25■□□□□ 0.03
CLN6-215ENST00000636674 ZNF449Q6P9G9 518 aa15.25■□□□□ 0.03
CLN6-215ENST00000636674 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.25■□□□□ 0.03
CLN6-215ENST00000636674 ACSF2Q96CM8 615 aaPredicted RBP15.25■□□□□ 0.03
CLN6-215ENST00000636674 C12orf42Q96LP6 360 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms