RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 EURLQ9NYK6 297 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 AFG3L2Q9Y4W6 797 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 NR2E3Q9Y5X4 410 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 CCDC195A0A1B0GUA6 201 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 ATP2A1O14983 1001 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 KCNA3P22001 575 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 RPL22P35268 128 aaKnown RBP14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 SCYL2Q6P3W7 929 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 GBP7Q8N8V2 638 aaPredicted RBP14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 TMEM174Q8WUU8 243 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 CFAP36Q96G28 342 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 CPXM1Q96SM3 734 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 TBC1D10AQ9BXI6 508 aa14.74□□□□□ -0.05
CACNA1A-228ENST00000636610 KIAA1217Q5T5P2 1943 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 LRCH4O75427 683 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 NEBLO76041 1014 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 PDHA1P08559 390 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 ATP2A2P16615 1042 aaKnown RBP14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 PTPRAP18433 802 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 PEX19P40855 299 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 GMPSP49915 693 aaPredicted RBP14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 OASLQ15646 514 aaKnown RBP14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 ASRGL1Q7L266 308 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 NLRP9Q7RTR0 991 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 AGBL3Q8NEM8 1001 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 PPP1R13LQ8WUF5 828 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 ACAD9Q9H845 621 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 ZNF395Q9H8N7 513 aaPredicted RBP14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 XPO7Q9UIA9 1087 aaKnown RBP14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 HEY1Q9Y5J3 304 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 KITP10721 976 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 TBXAS1P24557 533 aaPredicted RBP14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 ANKRD20A2Q5SQ80 823 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 ANKRD20A1Q5TYW2 823 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 ANKRD20A3Q5VUR7 823 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 TLDC1Q6P9B6 456 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 RFWD3Q6PCD5 774 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 DENND1AQ8TEH3 1009 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 MIEF2Q96C03 454 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 FAM111AQ96PZ2 611 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 TWNKQ96RR1 684 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 TEX13BQ9BXU2 312 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 PIH1D1Q9NWS0 290 aaKnown RBP14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 ARMCX1Q9P291 453 aa14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 PSMC3IPQ9P2W1 217 aaPredicted RBP14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 MARCOQ9UEW3 520 aaPredicted RBP14.73□□□□□ -0.05
CACNA1A-228ENST00000636610 EDF1O60869 148 aaKnown RBP14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 ASS1P00966 412 aaKnown RBP14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 PGK2P07205 417 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 T-ENOLP0DO92 83 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 CXCL8P10145 99 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 UBA1P22314 1058 aaKnown RBP14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 STAT5BP51692 787 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 RAD23BP54727 409 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 ZBTB16Q05516 673 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 STXBP2Q15833 593 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 ANGEL2Q5VTE6 544 aaKnown RBP14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 FKBP1CQ5VVH2 108 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 EEF1DP3Q658K8 133 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 TRIM72Q6ZMU5 477 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 TTC7BQ86TV6 843 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 NCAPG2Q86XI2 1143 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 PIWIL1Q96J94 861 aaKnown RBP14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 NUDCD1Q96RS6 583 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 PCYT2Q99447 389 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 DHX33Q9H6R0 707 aaKnown RBP14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 STK32BQ9NY57 414 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 RABGEF1Q9UJ41 708 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 ZFP69BQ9UJL9 534 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 SPATA31C2B4DYI2 1134 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 RBP3P10745 1247 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 TCF7P36402 384 aaPredicted RBP14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 NAMPTP43490 491 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 RGS7P49802 495 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 GEMIN4P57678 1058 aaKnown RBP14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 LMNB2Q03252 620 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 C15orf59Q2T9L4 293 aaPredicted RBP14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 SLFN12LQ6IEE8 588 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 CCDC125Q86Z20 511 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 FAM13CQ8NE31 585 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 SPATA18Q8TC71 538 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 MECRQ9BV79 373 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 USH1CQ9Y6N9 552 aa14.72□□□□□ -0.05
CACNA1A-228ENST00000636610 ALOX15BO15296 676 aa14.71□□□□□ -0.05
CACNA1A-228ENST00000636610 TCEA3O75764 348 aa14.71□□□□□ -0.05
CACNA1A-228ENST00000636610 CALB1P05937 261 aa14.71□□□□□ -0.05
CACNA1A-228ENST00000636610 ALDH3A1P30838 453 aa14.71□□□□□ -0.05
CACNA1A-228ENST00000636610 ELK3P41970 407 aa14.71□□□□□ -0.05
CACNA1A-228ENST00000636610 EIF3EP60228 445 aaKnown RBP14.71□□□□□ -0.05
CACNA1A-228ENST00000636610 TAF11Q15544 211 aa14.71□□□□□ -0.05
CACNA1A-228ENST00000636610 PDK4Q16654 411 aa14.71□□□□□ -0.05
CACNA1A-228ENST00000636610 RNF43Q68DV7 783 aa14.71□□□□□ -0.05
CACNA1A-228ENST00000636610 DEFB132Q7Z7B7 95 aa14.71□□□□□ -0.05
CACNA1A-228ENST00000636610 DTX3LQ8TDB6 740 aa14.71□□□□□ -0.05
CACNA1A-228ENST00000636610 SLC13A1Q9BZW2 595 aa14.71□□□□□ -0.05
CACNA1A-228ENST00000636610 NIF3L1Q9GZT8 377 aa14.71□□□□□ -0.05
CACNA1A-228ENST00000636610 EBF2Q9HAK2 575 aa14.71□□□□□ -0.05
CACNA1A-228ENST00000636610 A0A1B0GUA9 196 aa14.71□□□□□ -0.05
CACNA1A-228ENST00000636610 DKC1O60832 514 aaKnown RBP eCLIP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms