RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 ZNF334Q9HCZ1 680 aaPredicted RBP19.69■□□□□ 0.74
CLN6-214ENST00000636314 RALGAPA1Q6GYQ0 2036 aa19.69■□□□□ 0.74
CLN6-214ENST00000636314 NUP210Q8TEM1 1887 aaPredicted RBP19.69■□□□□ 0.74
CLN6-214ENST00000636314 GABRDO14764 452 aa19.68■□□□□ 0.74
CLN6-214ENST00000636314 CALUO43852 315 aaPredicted RBP19.68■□□□□ 0.74
CLN6-214ENST00000636314 PHACTR2O75167 634 aa19.68■□□□□ 0.74
CLN6-214ENST00000636314 GABRR2P28476 465 aa19.68■□□□□ 0.74
CLN6-214ENST00000636314 CASP4P49662 377 aa19.68■□□□□ 0.74
CLN6-214ENST00000636314 LMNB2Q03252 620 aa19.68■□□□□ 0.74
CLN6-214ENST00000636314 GIPC2Q8TF65 315 aa19.68■□□□□ 0.74
CLN6-214ENST00000636314 NELL1Q92832 810 aa19.68■□□□□ 0.74
CLN6-214ENST00000636314 CNTNAP3BQ96NU0 1288 aa19.68■□□□□ 0.74
CLN6-214ENST00000636314 MMS19Q96T76 1030 aa19.68■□□□□ 0.74
CLN6-214ENST00000636314 PI4K2AQ9BTU6 479 aa19.68■□□□□ 0.74
CLN6-214ENST00000636314 CNTNAP3Q9BZ76 1288 aa19.68■□□□□ 0.74
CLN6-214ENST00000636314 GZF1Q9H116 711 aaPredicted RBP19.68■□□□□ 0.74
CLN6-214ENST00000636314 ATXN3LQ9H3M9 355 aa19.68■□□□□ 0.74
CLN6-214ENST00000636314 ABCB6Q9NP58 842 aa19.68■□□□□ 0.74
CLN6-214ENST00000636314 DMAC2Q9NW81 257 aa19.68■□□□□ 0.74
CLN6-214ENST00000636314 GMEB2Q9UKD1 530 aa19.68■□□□□ 0.74
CLN6-214ENST00000636314 PRR5-ARHGAP8B1AHC4 643 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 MAN2B1O00754 1011 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 HCRTO43612 131 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 CLSTN1O94985 981 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 TNNC1P63316 161 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 ARHGAP8P85298 464 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 FZD5Q13467 585 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 BIRC3Q13489 604 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 KCNB1Q14721 858 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 ARHGAP15Q53QZ3 475 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 GAREM2Q75VX8 874 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 PLEKHO2Q8TD55 490 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 TMEM174Q8WUU8 243 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 KBTBD7Q8WVZ9 684 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 ZNF516Q92618 1163 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 PKMYT1Q99640 499 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 SYT15Q9BQS2 421 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 TRMT61BQ9BVS5 477 aaKnown RBP19.67■□□□□ 0.74
CLN6-214ENST00000636314 FAM126AQ9BYI3 521 aaPredicted RBP19.67■□□□□ 0.74
CLN6-214ENST00000636314 GTF3C4Q9UKN8 822 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 RAB23Q9ULC3 237 aa19.67■□□□□ 0.74
CLN6-214ENST00000636314 SHISA7A6NL88 538 aa19.66■□□□□ 0.74
CLN6-214ENST00000636314 LRRIQ3A6PVS8 624 aaPredicted RBP19.66■□□□□ 0.74
CLN6-214ENST00000636314 CST3P01034 146 aaPredicted RBP19.66■□□□□ 0.74
CLN6-214ENST00000636314 WARSP23381 471 aaKnown RBP19.66■□□□□ 0.74
CLN6-214ENST00000636314 CDC25CP30307 473 aa19.66■□□□□ 0.74
CLN6-214ENST00000636314 AP3M2P53677 418 aa19.66■□□□□ 0.74
CLN6-214ENST00000636314 CCDC142Q17RM4 750 aa19.66■□□□□ 0.74
CLN6-214ENST00000636314 STXBP5Q5T5C0 1151 aa19.66■□□□□ 0.74
CLN6-214ENST00000636314 CEP135Q66GS9 1140 aa19.66■□□□□ 0.74
CLN6-214ENST00000636314 LIMS2Q7Z4I7 341 aa19.66■□□□□ 0.74
CLN6-214ENST00000636314 SPATA2LQ8IUW3 424 aaPredicted RBP19.66■□□□□ 0.74
CLN6-214ENST00000636314 PARD3BQ8TEW8 1205 aa19.66■□□□□ 0.74
CLN6-214ENST00000636314 DEPDC1BQ8WUY9 529 aa19.66■□□□□ 0.74
CLN6-214ENST00000636314 SYAP1Q96A49 352 aaPredicted RBP19.66■□□□□ 0.74
CLN6-214ENST00000636314 TRPV4Q9HBA0 871 aa19.66■□□□□ 0.74
CLN6-214ENST00000636314 CDH9Q9ULB4 789 aa19.66■□□□□ 0.74
CLN6-214ENST00000636314 MAPK8IP1Q9UQF2 711 aa19.66■□□□□ 0.74
CLN6-214ENST00000636314 TRAF3IP3Q9Y228 551 aa19.66■□□□□ 0.74
CLN6-214ENST00000636314 FRMD4BQ9Y2L6 1034 aa19.66■□□□□ 0.74
CLN6-214ENST00000636314 OBSL1O75147 1896 aa19.66■□□□□ 0.74
CLN6-214ENST00000636314 STAU1O95793 577 aaKnown RBP19.65■□□□□ 0.74
CLN6-214ENST00000636314 GDI1P31150 447 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 ATICP31939 592 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 VIPR2P41587 438 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 GPR15P49685 360 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 NRLP54845 237 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 MYL6P60660 151 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 PSMC1P62191 440 aaKnown RBP19.65■□□□□ 0.74
CLN6-214ENST00000636314 RPL10AP62906 217 aaKnown RBP19.65■□□□□ 0.74
CLN6-214ENST00000636314 PPP2R5DQ14738 602 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 LPAL2Q16609 132 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 WDR72Q3MJ13 1102 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 GPR158Q5T848 1215 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 TDRD10Q5VZ19 366 aaKnown RBP19.65■□□□□ 0.74
CLN6-214ENST00000636314 VITQ6UXI7 678 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 C4orf50Q6ZRC1 276 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 FMR1NBQ8N0W7 255 aaPredicted RBP19.65■□□□□ 0.74
CLN6-214ENST00000636314 GUF1Q8N442 669 aaKnown RBP19.65■□□□□ 0.74
CLN6-214ENST00000636314 FAM3CQ92520 227 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 IRF7Q92985 503 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 E2F7Q96AV8 911 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 FUBP3Q96I24 572 aaKnown RBP eCLIP19.65■□□□□ 0.74
CLN6-214ENST00000636314 CHRDQ9H2X0 955 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 SNX25Q9H3E2 840 aa19.65■□□□□ 0.74
CLN6-214ENST00000636314 DENND4CQ5VZ89 1909 aa19.64■□□□□ 0.74
CLN6-214ENST00000636314 CACNA1BQ00975 2339 aa19.64■□□□□ 0.74
CLN6-214ENST00000636314 MYBPHLA2RUH7 354 aa19.64■□□□□ 0.73
CLN6-214ENST00000636314 DCDC2BA2VCK2 349 aa19.64■□□□□ 0.73
CLN6-214ENST00000636314 CSH1P0DML2 217 aa19.64■□□□□ 0.73
CLN6-214ENST00000636314 CSH2P0DML3 217 aa19.64■□□□□ 0.73
CLN6-214ENST00000636314 PSMC3P17980 439 aa19.64■□□□□ 0.73
CLN6-214ENST00000636314 NR2F2P24468 414 aa19.64■□□□□ 0.73
CLN6-214ENST00000636314 CYP2F1P24903 491 aa19.64■□□□□ 0.73
CLN6-214ENST00000636314 CLDN10P78369 228 aa19.64■□□□□ 0.73
CLN6-214ENST00000636314 CYP4F8P98187 520 aa19.64■□□□□ 0.73
CLN6-214ENST00000636314 PNOCQ13519 176 aa19.64■□□□□ 0.73
CLN6-214ENST00000636314 MAPRE1Q15691 268 aaKnown RBP19.64■□□□□ 0.73
CLN6-214ENST00000636314 ZNF699Q32M78 642 aa19.64■□□□□ 0.73
CLN6-214ENST00000636314 CFAP221Q4G0U5 840 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms