RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	GSTT2B	P0CG30	244 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	RARB	P10826	455 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	VCL	P18206	1134 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	NR2F2	P24468	414 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	ACTR3	P61158	418 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	PTK2	Q05397	1052 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	PPAT	Q06203	517 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	DNAJC3	Q13217	504 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	ZNF423	Q2M1K9	1284 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	ARSH	Q5FYA8	562 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	DEPDC1	Q5TB30	811 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	ZNF571	Q7Z3V5	609 aa	Predicted RBP	11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	MTDH	Q86UE4	582 aa	Known RBP	11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	TRIM50	Q86XT4	487 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	SCYL3	Q8IZE3	742 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	SREK1	Q8WXA9	508 aa	Known RBP	11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	TEPSIN	Q96N21	525 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	HSD17B14	Q9BPX1	270 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	OSBPL8	Q9BZF1	889 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	KLHL4	Q9C0H6	718 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	PARVG	Q9HBI0	331 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	SLC38A10	Q9HBR0	1119 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	TBC1D22B	Q9NU19	505 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	ANKFY1	Q9P2R3	1169 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	MTO1	Q9Y2Z2	717 aa	Known RBP	11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	ZMYM2	Q9UBW7	1377 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	DICER1	Q9UPY3	1922 aa	Known RBP	11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	SPECC1L-ADORA2A	F8WAN1	911 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	CHMP2A	O43633	222 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	GCNT3	O95395	438 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	CLPTM1	O96005	669 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	TFAP2A	P05549	437 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	ESRRA	P11474	423 aa	Predicted RBP	11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	ZNF12	P17014	697 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	TCF7	P36402	384 aa	Predicted RBP	11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	PPARG	P37231	505 aa	Predicted RBP	11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	CETN2	P41208	172 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	TMED10	P49755	219 aa	Known RBP	11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	OAZ1	P54368	228 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	ZBTB17	Q13105	803 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	UBAP2	Q5T6F2	1119 aa	Known RBP	11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	KYAT3	Q6YP21	454 aa	Known RBP	11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	MIER3	Q7Z3K6	550 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	TMPRSS6	Q8IU80	811 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	TPH2	Q8IWU9	490 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	MARVELD2	Q8N4S9	558 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	FAM172A	Q8WUF8	416 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	HSPBAP1	Q96EW2	488 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	MKNK1	Q9BUB5	465 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	GOLPH3	Q9H4A6	298 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	ERVK-5	Q9HDB9	667 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	FBXO28	Q9NVF7	368 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	TAS2R1	Q9NYW7	299 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	HACL1	Q9UJ83	578 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	NAALADL1	Q9UQQ1	740 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	BCS1L	Q9Y276	419 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	HEY1	Q9Y5J3	304 aa		11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	GPC6	Q9Y625	555 aa	Predicted RBP	11.28	□□□□□ -0.6
CHD2-223	ENST00000636306	MYH11	P35749	1972 aa		11.27	□□□□□ -0.6
CHD2-223	ENST00000636306	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	FZD9	O00144	591 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	FBP2	O00757	339 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	DENR	O43583	198 aa	Known RBP	11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	DKC1	O60832	514 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	TMEM253	P0C7T8	217 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	VDR	P11473	427 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	XRCC5	P13010	732 aa	Known RBP	11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	KRT13	P13646	458 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	ITIH2	P19823	946 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	JAK3	P52333	1124 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	PFKP	Q01813	784 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	NDUFA5	Q16718	116 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	USP41	Q3LFD5	358 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	TKFC	Q3LXA3	575 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	DNAL1	Q4LDG9	190 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	DCAF12L1	Q5VU92	463 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	RINT1	Q6NUQ1	792 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	RHBDF2	Q6PJF5	856 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	SYDE1	Q6ZW31	735 aa	Predicted RBP	11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	GPIHBP1	Q8IV16	184 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	PRELID2	Q8N945	189 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	C12orf50	Q8NA57	414 aa	Predicted RBP	11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	RDM1	Q8NG50	284 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	RFFL	Q8WZ73	363 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	SLCO2A1	Q92959	643 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	EEF2KMT	Q96G04	330 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	C12orf42	Q96LP6	360 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306		Q9H521	79 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	DDX18	Q9NVP1	670 aa	Known RBP	11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	PCDHB13	Q9Y5F0	798 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	GJA3	Q9Y6H8	435 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	AK5	Q9Y6K8	562 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	ZNF536	O15090	1300 aa		11.27	□□□□□ -0.61
CHD2-223	ENST00000636306	LOC285556	D6RIA3	1793 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	C19orf81	C9J6K1	198 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	EML1	O00423	815 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	NR3C1	P04150	777 aa		11.26	□□□□□ -0.61
CHD2-223	ENST00000636306	P4HB	P07237	508 aa	Known RBP	11.26	□□□□□ -0.61

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