RNA–Protein interactions for RNA: ENST00000636058.1

CACNA1A-223, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-223	ENST00000636058	THAP2	Q9H0W7	228 aa		10.16	□□□□□ -0.78
CACNA1A-223	ENST00000636058	LZTFL1	Q9NQ48	299 aa		10.16	□□□□□ -0.78
CACNA1A-223	ENST00000636058	CHST7	Q9NS84	486 aa		10.16	□□□□□ -0.78
CACNA1A-223	ENST00000636058	CYTH4	Q9UIA0	394 aa		10.16	□□□□□ -0.78
CACNA1A-223	ENST00000636058	GTF3C4	Q9UKN8	822 aa		10.16	□□□□□ -0.78
CACNA1A-223	ENST00000636058	NLRC5	Q86WI3	1866 aa		10.16	□□□□□ -0.78
CACNA1A-223	ENST00000636058	LCHN	A4D1U4	455 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	OR6C75	A6NL08	312 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	BTNL10	A8MVZ5	291 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058		H7C4K7	107 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	KRT86	O43790	486 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	TBC1D4	O60343	1298 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	CAPN15	O75808	1086 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	SOD2	P04179	222 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	SETSIP	P0DME0	302 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	ABCB4	P21439	1286 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	MMP8	P22894	467 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	ADORA2B	P29275	332 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	BCAT1	P54687	386 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	TSPY1	Q01534	308 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	C1QBP	Q07021	282 aa	Known RBP	10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	PTP4A2	Q12974	167 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	MAPRE1	Q15691	268 aa	Known RBP	10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	USP41	Q3LFD5	358 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	CTXN3	Q4LDR2	81 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	ARHGAP29	Q52LW3	1261 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	ZNF280D	Q6N043	979 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	ANKS3	Q6ZW76	656 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	DDX53	Q86TM3	631 aa	Known RBP	10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	LRRTM3	Q86VH5	581 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	MCOLN2	Q8IZK6	566 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	UBA3	Q8TBC4	463 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	PIK3R5	Q8WYR1	880 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	SECISBP2L	Q93073	1101 aa	Known RBP	10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	MYLPF	Q96A32	169 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	TRIM11	Q96F44	468 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	VCPIP1	Q96JH7	1222 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	GDF15	Q99988	308 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	HERC2P3	Q9BVR0	1158 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	B3GNT5	Q9BYG0	378 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	TMLHE	Q9NVH6	421 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	HESX1	Q9UBX0	185 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	TRIM10	Q9UDY6	481 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	STK39	Q9UEW8	545 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	PCDHB12	Q9Y5F1	795 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	DUSP10	Q9Y6W6	482 aa		10.15	□□□□□ -0.78
CACNA1A-223	ENST00000636058	PTPRD	P23468	1912 aa		10.15	□□□□□ -0.79
CACNA1A-223	ENST00000636058	GBF1	Q92538	1859 aa		10.15	□□□□□ -0.79
CACNA1A-223	ENST00000636058	NCAN	O14594	1321 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058		A0A0A6YYK5	440 aa	Predicted RBP	10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	FAM170A	A1A519	330 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	LINC01553	A4QN01	128 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	CLDN5	O00501	218 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	FGF18	O76093	207 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	MYBL1	P10243	752 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	RABGGTB	P53611	331 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	GPC5	P78333	572 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	DSG1	Q02413	1049 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	PDE4C	Q08493	712 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	BST2	Q10589	180 aa	Known RBP	10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	PDCL	Q13371	301 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	TCEAL1	Q15170	157 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	PTPN20	Q4JDL3	420 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	FAM109B	Q6ICB4	259 aa	Predicted RBP	10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	MMS22L	Q6ZRQ5	1243 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	NYAP1	Q6ZVC0	841 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	FAM35A	Q86V20	835 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	DCP1B	Q8IZD4	617 aa	Known RBP	10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	STK32A	Q8WU08	396 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	SLC35F5	Q8WV83	523 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	ARHGEF26	Q96DR7	871 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	NOX5	Q96PH1	765 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	CPXM1	Q96SM3	734 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	C11orf70	Q9BRQ4	267 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	DUSP16	Q9BY84	665 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	UBE2O	Q9C0C9	1292 aa	Known RBP	10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	AVEN	Q9NQS1	362 aa	Predicted RBP	10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	ADAM22	Q9P0K1	906 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	MTRR	Q9UBK8	725 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	SALL4	Q9UJQ4	1053 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	RWDD3	Q9Y3V2	267 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	BACE2	Q9Y5Z0	518 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	PLXNA4	Q9HCM2	1894 aa		10.14	□□□□□ -0.79
CACNA1A-223	ENST00000636058	GRXCR1	A8MXD5	290 aa		10.13	□□□□□ -0.79
CACNA1A-223	ENST00000636058	C5orf67	F2Z3F1	127 aa		10.13	□□□□□ -0.79
CACNA1A-223	ENST00000636058		H0YGN5	161 aa		10.13	□□□□□ -0.79
CACNA1A-223	ENST00000636058	TULP2	O00295	520 aa		10.13	□□□□□ -0.79
CACNA1A-223	ENST00000636058	XPO1	O14980	1071 aa	Known RBP	10.13	□□□□□ -0.79
CACNA1A-223	ENST00000636058	BEST1	O76090	585 aa		10.13	□□□□□ -0.79
CACNA1A-223	ENST00000636058	CYP1A2	P05177	515 aa		10.13	□□□□□ -0.79
CACNA1A-223	ENST00000636058	CALB1	P05937	261 aa		10.13	□□□□□ -0.79
CACNA1A-223	ENST00000636058	OR4Q2	P0C623	313 aa		10.13	□□□□□ -0.79
CACNA1A-223	ENST00000636058	FAM200B	P0CF97	657 aa		10.13	□□□□□ -0.79
CACNA1A-223	ENST00000636058	NPR3	P17342	541 aa		10.13	□□□□□ -0.79
CACNA1A-223	ENST00000636058	RRM1	P23921	792 aa		10.13	□□□□□ -0.79
CACNA1A-223	ENST00000636058	BMPR1A	P36894	532 aa		10.13	□□□□□ -0.79
CACNA1A-223	ENST00000636058	PLA2G4A	P47712	749 aa		10.13	□□□□□ -0.79
CACNA1A-223	ENST00000636058	GABRB2	P47870	512 aa		10.13	□□□□□ -0.79
CACNA1A-223	ENST00000636058	RPL34	P49207	117 aa	Known RBP	10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms