RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 FANCLQ9NW38 375 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.37□□□□□ -0.75
LINC00339-210ENST00000635675 MAGEC2Q9UBF1 373 aaPredicted RBP10.37□□□□□ -0.75
LINC00339-210ENST00000635675 VCANP13611 3396 aa10.37□□□□□ -0.75
LINC00339-210ENST00000635675 PTPRDP23468 1912 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 DOCK8Q8NF50 2099 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 KCNJ18B7U540 433 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 MICAL2O94851 1124 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 LAMP2P13473 410 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 CD58P19256 250 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 SP100P23497 879 aaPredicted RBP10.36□□□□□ -0.75
LINC00339-210ENST00000635675 BDNFP23560 247 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 EEF1GP26641 437 aaKnown RBP10.36□□□□□ -0.75
LINC00339-210ENST00000635675 SSTR3P32745 418 aaPredicted RBP10.36□□□□□ -0.75
LINC00339-210ENST00000635675 CCR2P41597 374 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 GPR15P49685 360 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 RPL10AP62906 217 aaKnown RBP10.36□□□□□ -0.75
LINC00339-210ENST00000635675 MYL5Q02045 173 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 CYP27A1Q02318 531 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 LRMPQ12912 555 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 ORC1Q13415 861 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 KCNJ12Q14500 433 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 NCAPHQ15003 741 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 MAN2A1Q16706 1144 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 DDR2Q16832 855 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 SLC5A9Q2M3M2 681 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 ANO6Q4KMQ2 910 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 TCP11X2Q5H9J9 407 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 MIIPQ5JXC2 388 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 PRSS36Q5K4E3 855 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 CYP4A22Q5TCH4 519 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 VSTM1Q6UX27 236 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 PAQR9Q6ZVX9 377 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 ITIH5Q86UX2 942 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 TMC8Q8IU68 726 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 ZDHHC14Q8IZN3 488 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 UBR7Q8N806 425 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 TDRD5Q8NAT2 981 aaKnown RBP10.36□□□□□ -0.75
LINC00339-210ENST00000635675 LEMD2Q8NC56 503 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 GIPC2Q8TF65 315 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 ACSF2Q96CM8 615 aaPredicted RBP10.36□□□□□ -0.75
LINC00339-210ENST00000635675 NT5C1BQ96P26 610 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 MYADMQ96S97 322 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 TUBGCP2Q9BSJ2 902 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 NT5C1AQ9BXI3 368 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 ELOVL4Q9GZR5 314 aa10.36□□□□□ -0.75
LINC00339-210ENST00000635675 SYCE3A1L190 88 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 GTPBP10A4D1E9 387 aaKnown RBP10.35□□□□□ -0.75
LINC00339-210ENST00000635675 CLDN5O00501 218 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 NRG2O14511 850 aaPredicted RBP10.35□□□□□ -0.75
LINC00339-210ENST00000635675 ZNF197O14709 1029 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 MOSPD3O75425 235 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 HMGA1P17096 107 aaKnown RBP10.35□□□□□ -0.75
LINC00339-210ENST00000635675 TBXAS1P24557 533 aaPredicted RBP10.35□□□□□ -0.75
LINC00339-210ENST00000635675 GBP2P32456 591 aaPredicted RBP10.35□□□□□ -0.75
LINC00339-210ENST00000635675 RAD23BP54727 409 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 VEPH1Q14D04 833 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 VWA3BQ502W6 1294 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 SDHAF4Q5VUM1 108 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 PHLDB3Q6NSJ2 640 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 GBP6Q6ZN66 633 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 PDZD4Q76G19 769 aaPredicted RBP10.35□□□□□ -0.75
LINC00339-210ENST00000635675 GET4Q7L5D6 327 aaPredicted RBP10.35□□□□□ -0.75
LINC00339-210ENST00000635675 RNF135Q8IUD6 432 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 SCN4BQ8IWT1 228 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 FUKQ8N0W3 1084 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 PLCD3Q8N3E9 789 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 C12orf29Q8N999 325 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 FAM200AQ8TCP9 573 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 GPR152Q8TDT2 470 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 FGF13Q92913 245 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 TCEAL4Q96EI5 215 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 SPATA17Q96L03 361 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 CEP295NLQ96MC4 621 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 BPIFA3Q9BQP9 254 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 CRACR2AQ9BSW2 395 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 ZNF518BQ9C0D4 1074 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 NAT10Q9H0A0 1025 aaKnown RBP10.35□□□□□ -0.75
LINC00339-210ENST00000635675 INTS2Q9H0H0 1204 aaKnown RBP10.35□□□□□ -0.75
LINC00339-210ENST00000635675 HSD3B7Q9H2F3 369 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 NDST4Q9H3R1 872 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 ASAH2Q9NR71 780 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 TMEM30AQ9NV96 361 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 EPS15L1Q9UBC2 864 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 CDH7Q9ULB5 785 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 MRPS23Q9Y3D9 190 aaKnown RBP10.35□□□□□ -0.75
LINC00339-210ENST00000635675 ZFP37Q9Y6Q3 630 aaPredicted RBP10.35□□□□□ -0.75
LINC00339-210ENST00000635675 CUL9Q8IWT3 2517 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 MYO10Q9HD67 2058 aa10.35□□□□□ -0.75
LINC00339-210ENST00000635675 NOL4O94818 638 aa10.34□□□□□ -0.75
LINC00339-210ENST00000635675 MYL4P12829 197 aa10.34□□□□□ -0.75
LINC00339-210ENST00000635675 CCDC130P13994 396 aa10.34□□□□□ -0.75
LINC00339-210ENST00000635675 PRKCSHP14314 528 aaPredicted RBP10.34□□□□□ -0.75
LINC00339-210ENST00000635675 ZNF18P17022 549 aa10.34□□□□□ -0.75
LINC00339-210ENST00000635675 SLC9A1P19634 815 aa10.34□□□□□ -0.75
LINC00339-210ENST00000635675 ACO1P21399 889 aaKnown RBP10.34□□□□□ -0.75
LINC00339-210ENST00000635675 PON1P27169 355 aa10.34□□□□□ -0.75
LINC00339-210ENST00000635675 GRIK1P39086 918 aa10.34□□□□□ -0.75
LINC00339-210ENST00000635675 CACNA2D1P54289 1103 aa10.34□□□□□ -0.75
LINC00339-210ENST00000635675 GCNT1Q02742 428 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms