RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 ARHGEF2Q92974 986 aaKnown RBP13.04□□□□□ -0.32
PTPN11-205ENST00000635625 OPTNQ96CV9 577 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 NCAPGQ9BPX3 1015 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 DDX23Q9BUQ8 820 aaKnown RBP13.04□□□□□ -0.32
PTPN11-205ENST00000635625 KDM4CQ9H3R0 1056 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 SAMD15Q9P1V8 674 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 FETUBQ9UGM5 382 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 ZNF148Q9UQR1 794 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 MGAMO43451 1857 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 SMIM23A6NLE4 172 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 CILPO75339 1184 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 LGALS2P05162 132 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 STAG3L1P0CL83 205 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 CXCL8P10145 99 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 VDRP11473 427 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 CD19P15391 556 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 TSHRP16473 764 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 MAGEA4P43358 317 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 SLC18A1P54219 525 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 RAD23BP54727 409 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 CDC42EP1Q00587 391 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 SLC25A11Q02978 314 aaKnown RBP13.04□□□□□ -0.32
PTPN11-205ENST00000635625 PTPN11Q06124 597 aaPredicted RBP13.04□□□□□ -0.32
PTPN11-205ENST00000635625 INCA1Q0VD86 236 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 TTLL12Q14166 644 aaPredicted RBP13.04□□□□□ -0.32
PTPN11-205ENST00000635625 PCBP1Q15365 356 aaKnown RBP eCLIP13.04□□□□□ -0.32
PTPN11-205ENST00000635625 P3H1Q32P28 736 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 WDR78Q5VTH9 848 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 EEF1DP3Q658K8 133 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 DENND1BQ6P3S1 775 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 PPP1R21Q6ZMI0 780 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 BBS12Q6ZW61 710 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 ARMCX2Q7L311 632 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 ANKS1BQ7Z6G8 1248 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 EXOC3L1Q86VI1 746 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 ZNF410Q86VK4 478 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 SLC35B2Q8TB61 432 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 AFG1LQ8WV93 481 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 CLMNQ96JQ2 1002 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 LRRC4CQ9HCJ2 640 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 SIX4Q9UIU6 781 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 LHX6Q9UPM6 363 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 DERAQ9Y315 318 aa13.04□□□□□ -0.32
PTPN11-205ENST00000635625 LRRD1A4D1F6 860 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 F8VP50 259 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 O00370 1275 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 TOMM70O94826 608 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 PCK1P35558 622 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 ARSEP51690 589 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 CLCN3P51790 818 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 SNX16P57768 344 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 PSMC1P62191 440 aaKnown RBP13.03□□□□□ -0.32
PTPN11-205ENST00000635625 ACTN3Q08043 901 aaPredicted RBP13.03□□□□□ -0.32
PTPN11-205ENST00000635625 IFT88Q13099 833 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 TMEM132DQ14C87 1099 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 LONRF1Q17RB8 773 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 DCAF4L1Q3SXM0 396 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 PTPN20Q4JDL3 420 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 RNF187Q5TA31 235 aaPredicted RBP13.03□□□□□ -0.32
PTPN11-205ENST00000635625 SCARA5Q6ZMJ2 495 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 ARHGEF18Q6ZSZ5 1173 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 PIGWQ7Z7B1 504 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 CNPY4Q8N129 248 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 C1orf127Q8N9H9 656 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 MDM1Q8TC05 714 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 MCRS1Q96EZ8 462 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 TMEM176AQ96HP8 235 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 RBM15Q96T37 977 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTPN11-205ENST00000635625 PDZD7Q9H5P4 517 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 SYNCQ9H7C4 482 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 IFT122Q9HBG6 1241 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 NXF1Q9UBU9 619 aaKnown RBP13.03□□□□□ -0.32
PTPN11-205ENST00000635625 DNPEPQ9ULA0 475 aa13.03□□□□□ -0.32
PTPN11-205ENST00000635625 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTPN11-205ENST00000635625 LACTBL1A8MY62 500 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 B4GALT5O43286 388 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 STRNO43815 780 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 PEX10O60683 326 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 GSTA1P08263 222 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 KRT19P08727 400 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 INSRRP14616 1297 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 DESP17661 470 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 SLCO1A2P46721 670 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 LIG3P49916 1009 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 RBP5P82980 135 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 OGDHQ02218 1023 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 TRIP13Q15645 432 aaPredicted RBP13.02□□□□□ -0.32
PTPN11-205ENST00000635625 AMHR2Q16671 573 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 KYNUQ16719 465 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 Q3C1V9 767 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 ZNF792Q3KQV3 632 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 WDR72Q3MJ13 1102 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 CENPUQ71F23 418 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 VSIG1Q86XK7 387 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 XYLT1Q86Y38 959 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 SLC4A11Q8NBS3 891 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 GPRC5AQ8NFJ5 357 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 DYDC1Q8WWB3 177 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 SGSM3Q96HU1 749 aa13.02□□□□□ -0.32
PTPN11-205ENST00000635625 ADPGKQ9BRR6 497 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms