RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 ALG1L2C9J202 215 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 H0YIZ8 118 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 MYO1FO00160 1098 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 ADAMTS3O15072 1205 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 GRM6O15303 877 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 SMAD6O43541 496 aaKnown RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 KRT86O43790 486 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 BCAR3O75815 825 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 SNUPNO95149 360 aaKnown RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 EYA4O95677 639 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 FAM90A13PP0C7W8 464 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 FAM90A24PP0C7X0 464 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 CYP19A1P11511 503 aaPredicted RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 PRF1P14222 555 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 ENGP17813 658 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 MT3P25713 68 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 CYP2C18P33260 490 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 IARSP41252 1262 aaKnown RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 CDKN2AP42771 156 aaKnown RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 KCNJ5P48544 419 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 CDKN1CP49918 316 aaPredicted RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 SLC5A3P53794 718 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 SLC16A1P53985 500 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 EEFSECP57772 596 aaKnown RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 CYP4F2P78329 520 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 MRPS9P82933 396 aaKnown RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 AMPD3Q01432 767 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 KIF23Q02241 960 aaPredicted RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 PIGFQ07326 219 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 KLF1Q13351 362 aaPredicted RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 MTMR1Q13613 665 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 BMPR2Q13873 1038 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 KRT81Q14533 505 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 HLXQ14774 488 aaPredicted RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 RBMS2Q15434 407 aaKnown RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 ATP2B3Q16720 1220 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 ZNF585BQ52M93 769 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 AARS2Q5JTZ9 985 aaKnown RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 PCID2Q5JVF3 399 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 DGKKQ5KSL6 1271 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 GJC2Q5T442 439 aaPredicted RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 EFCAB2Q5VUJ9 269 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 SLC30A10Q6XR72 485 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 C9orf47Q6ZRZ4 202 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 C18orf65Q6ZTR6 163 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 ZNF804AQ7Z570 1209 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 RSPH3Q86UC2 560 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 ZBTB46Q86UZ6 589 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 RHOT1Q8IXI2 618 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 CFAP52Q8N1V2 620 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 MIER2Q8N344 545 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 PRPF38AQ8NAV1 312 aaKnown RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 C8orf58Q8NAV2 365 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 SLC17A8Q8NDX2 589 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 TMIEQ8NEW7 156 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 NLGN4YQ8NFZ3 816 aaPredicted RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 CYP2W1Q8TAV3 490 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 KLHDC4Q8TBB5 520 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 LMBR1Q8WVP7 490 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 FAXDC2Q96IV6 333 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 VCPIP1Q96JH7 1222 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 TRIB1Q96RU8 372 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 PACSIN1Q9BY11 444 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 PUS7LQ9H0K6 701 aaKnown RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 SMOC2Q9H3U7 446 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 PCDH12Q9NPG4 1184 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 CCM2LQ9NUG4 571 aaPredicted RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 SAP30BPQ9UHR5 308 aaKnown RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 SCOCQ9UIL1 159 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 TRHDEQ9UKU6 1024 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 CROCC2H7BZ55 1655 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 ADAMTSL3P82987 1691 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 EPRSP07814 1512 aaKnown RBP1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 ARHGEF40Q8TER5 1519 aa1.44□□□□□ -2.18
SMARCB1-209ENST00000635578 ADGRL1O94910 1474 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 GRIN2AQ12879 1464 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 GAPVD1Q14C86 1478 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 WASHC2CQ9Y4E1 1318 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 PDS5BQ9NTI5 1447 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 LY6G6EA0A0G2JKS1 128 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 SHTN1A0MZ66 631 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 KRTAP9-6A8MVA2 160 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 PPM1GO15355 546 aaPredicted RBP1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 TRIAP1O43715 76 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 ABLIM3O94929 683 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 NXPH3O95157 252 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 OAZ2O95190 189 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 IL33O95760 270 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 VIL1P09327 827 aaKnown RBP1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 SBK3P0C264 359 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 TMEM191BP0C7N4 346 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 T-ENOLP0DO92 83 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 TGFB3P10600 412 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 PSG1P11464 419 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 CHRM3P20309 590 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 TNFRSF1BP20333 461 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 ATP5F1P24539 256 aaPredicted RBP1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 IL1R2P27930 398 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 CD6P30203 668 aa1.43□□□□□ -2.18
SMARCB1-209ENST00000635578 GPR3P46089 330 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms