RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 OR4Q2P0C623 313 aa15.34■□□□□ 0.05
LINC00339-208ENST00000634934 CCDC142Q17RM4 750 aa15.34■□□□□ 0.05
LINC00339-208ENST00000634934 MDH1BQ5I0G3 518 aa15.34■□□□□ 0.05
LINC00339-208ENST00000634934 INTS6LQ5JSJ4 861 aaKnown RBP15.34■□□□□ 0.05
LINC00339-208ENST00000634934 RSPO2Q6UXX9 243 aaPredicted RBP15.34■□□□□ 0.05
LINC00339-208ENST00000634934 CRYBG2Q8N1P7 616 aa15.34■□□□□ 0.05
LINC00339-208ENST00000634934 C12orf29Q8N999 325 aa15.34■□□□□ 0.05
LINC00339-208ENST00000634934 SYN2Q92777 582 aaPredicted RBP15.34■□□□□ 0.05
LINC00339-208ENST00000634934 DNAJC7Q99615 494 aa15.34■□□□□ 0.05
LINC00339-208ENST00000634934 CRTAC1Q9NQ79 661 aa15.34■□□□□ 0.05
LINC00339-208ENST00000634934 FAM49BQ9NUQ9 324 aa15.34■□□□□ 0.05
LINC00339-208ENST00000634934 GTF3C4Q9UKN8 822 aa15.34■□□□□ 0.05
LINC00339-208ENST00000634934 BACE2Q9Y5Z0 518 aa15.34■□□□□ 0.05
LINC00339-208ENST00000634934 CDY1Q9Y6F8 540 aa15.34■□□□□ 0.05
LINC00339-208ENST00000634934 VWA8A3KMH1 1905 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 MYBPHLA2RUH7 354 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 THAP12O43422 761 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 CPB1P15086 417 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 CYP11B1P15538 503 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 IGFBP4P22692 258 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 BRD2P25440 801 aaKnown RBP15.33■□□□□ 0.05
LINC00339-208ENST00000634934 OR1D2P34982 312 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 PDE6CP51160 858 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 KLHL30Q0D2K2 578 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 SMC1AQ14683 1233 aaKnown RBP15.33■□□□□ 0.05
LINC00339-208ENST00000634934 SLC39A12Q504Y0 691 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 SGO2Q562F6 1265 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 TAF3Q5VWG9 929 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 SMYD5Q6GMV2 418 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 IRF2BP2Q7Z5L9 587 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 LRRTM3Q86VH5 581 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 DCP1BQ8IZD4 617 aaKnown RBP15.33■□□□□ 0.05
LINC00339-208ENST00000634934 CLSTN3Q9BQT9 956 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 OXCT2Q9BYC2 517 aaPredicted RBP15.33■□□□□ 0.05
LINC00339-208ENST00000634934 ZCWPW1Q9H0M4 648 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 NGRNQ9NPE2 291 aaKnown RBP15.33■□□□□ 0.05
LINC00339-208ENST00000634934 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.33■□□□□ 0.05
LINC00339-208ENST00000634934 TRMT1Q9NXH9 659 aaKnown RBP15.33■□□□□ 0.05
LINC00339-208ENST00000634934 PCDHGC5Q9Y5F6 944 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 PRUNE2Q8WUY3 3088 aa15.33■□□□□ 0.05
LINC00339-208ENST00000634934 EFCAB8A8MWE9 144 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 ADAM12O43184 909 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 TBC1D4O60343 1298 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 VDRP11473 427 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 CCDC130P13994 396 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 FOSL2P15408 326 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 SSTR3P32745 418 aaPredicted RBP15.33■□□□□ 0.04
LINC00339-208ENST00000634934 IRS1P35568 1242 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 CYP27A1Q02318 531 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 CREMQ03060 361 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 CAMK1Q14012 370 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 TDRD12Q587J7 1177 aaKnown RBP15.33■□□□□ 0.04
LINC00339-208ENST00000634934 NOP9Q86U38 636 aaKnown RBP15.33■□□□□ 0.04
LINC00339-208ENST00000634934 GPR65Q8IYL9 337 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 KRT222Q8N1A0 295 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 MYCBPAPQ8TBZ2 947 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 TFAP2BQ92481 460 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 ZNF592Q92610 1267 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 MED10Q9BTT4 135 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 TMLHEQ9NVH6 421 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 KIAA1257Q9ULG3 409 aa15.33■□□□□ 0.04
LINC00339-208ENST00000634934 TSC2P49815 1807 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 HIDE1A8MVS5 230 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 FSCN2O14926 492 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 TEX28O15482 410 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 LILRB3O75022 631 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 SERPING1P05155 500 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 ADORA2BP29275 332 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 HNRNPH3P31942 346 aaKnown RBP15.32■□□□□ 0.04
LINC00339-208ENST00000634934 MAPRE1Q15691 268 aaKnown RBP15.32■□□□□ 0.04
LINC00339-208ENST00000634934 SLC8B1Q6J4K2 584 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 FAM171BQ6P995 826 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 MRPL43Q8N983 215 aaKnown RBP15.32■□□□□ 0.04
LINC00339-208ENST00000634934 SLC2A14Q8TDB8 520 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 EPS8L1Q8TE68 723 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 SLC20A1Q8WUM9 679 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 ZNF606Q8WXB4 792 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 MYLPFQ96A32 169 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 CYFIP2Q96F07 1278 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 PGLYRP2Q96PD5 576 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 PKMYT1Q99640 499 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 BAG1Q99933 345 aaPredicted RBP15.32■□□□□ 0.04
LINC00339-208ENST00000634934 EMILIN2Q9BXX0 1053 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 HAUS4Q9H6D7 363 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 RXFP1Q9HBX9 757 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 FNIP2Q9P278 1114 aa15.32■□□□□ 0.04
LINC00339-208ENST00000634934 C2orf71A6NGG8 1288 aa15.31■□□□□ 0.04
LINC00339-208ENST00000634934 CLDN5O00501 218 aa15.31■□□□□ 0.04
LINC00339-208ENST00000634934 MED7O43513 233 aa15.31■□□□□ 0.04
LINC00339-208ENST00000634934 CNPP09543 421 aaKnown RBP15.31■□□□□ 0.04
LINC00339-208ENST00000634934 NDUFV1P49821 464 aa15.31■□□□□ 0.04
LINC00339-208ENST00000634934 ROR1Q01973 937 aa15.31■□□□□ 0.04
LINC00339-208ENST00000634934 GPR17Q13304 367 aa15.31■□□□□ 0.04
LINC00339-208ENST00000634934 PPP1R26Q5T8A7 1209 aaPredicted RBP15.31■□□□□ 0.04
LINC00339-208ENST00000634934 PDE12Q6L8Q7 609 aaKnown RBP15.31■□□□□ 0.04
LINC00339-208ENST00000634934 WDR59Q6PJI9 974 aa15.31■□□□□ 0.04
LINC00339-208ENST00000634934 SYT10Q6XYQ8 523 aa15.31■□□□□ 0.04
LINC00339-208ENST00000634934 SPATA2LQ8IUW3 424 aaPredicted RBP15.31■□□□□ 0.04
LINC00339-208ENST00000634934 PCED1BQ96HM7 432 aa15.31■□□□□ 0.04
LINC00339-208ENST00000634934 GAS2L1Q99501 681 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms