RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 TIGD1Q96MW7 591 aa16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 GBP4Q96PP9 640 aa16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 SLC46A2Q9BY10 475 aa16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 ZCWPW1Q9H0M4 648 aa16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 DPP3Q9NY33 737 aa16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 OBP2AQ9NY56 170 aa16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 ABI2Q9NYB9 513 aaPredicted RBP16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 HSFX1Q9UBD0 423 aa16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 AGO2Q9UKV8 859 aaKnown RBP16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 STYXL1Q9Y6J8 313 aa16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 NCOR2Q9Y618 2525 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 ANO9A1A5B4 782 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 SLC30A4O14863 429 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 EXTL3O43909 919 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 PRPF40AO75400 957 aaKnown RBP16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 CYP11A1P05108 521 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 ATF6P18850 670 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 PAX3P23760 479 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 CDC25CP30307 473 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 PLCB2Q00722 1185 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 ITPRIPL2Q3MIP1 535 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 WSCD1Q658N2 575 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 EPM2AIP1Q7L775 607 aaPredicted RBP16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 LRRTM3Q86VH5 581 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 MAB21L3Q8N8X9 362 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 ZNF507Q8TCN5 953 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 SCFD1Q8WVM8 642 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 IKZF4Q9H2S9 585 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 DSEQ9UL01 958 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 DERAQ9Y315 318 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 TSC2P49815 1807 aa16.72■□□□□ 0.27
SNRNP48-203ENST00000634363 SPTBN2O15020 2390 aa16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 PAPSS2O95340 614 aaPredicted RBP16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 SMC2O95347 1197 aa16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 ADRB1P08588 477 aa16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 GARTP22102 1010 aa16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 TAF6P49848 677 aa16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 CCINQ13939 588 aa16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 CCDC6Q16204 474 aa16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 HS2ST1Q7LGA3 356 aa16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 NELFCDQ8IXH7 590 aa16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 CMTM8Q8IZV2 173 aa16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 TTC16Q8NEE8 873 aa16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 ARRDC1-AS1Q9H2J1 176 aa16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 EBF3Q9H4W6 596 aa16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 ASB7Q9H672 318 aa16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 IL21Q9HBE4 155 aa16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 RMND1Q9NWS8 449 aa16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 MAGED2Q9UNF1 606 aaPredicted RBP16.71■□□□□ 0.27
SNRNP48-203ENST00000634363 DENND4CQ5VZ89 1909 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 KIAA0391O15091 583 aaKnown RBP16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 RHOBTB3O94955 611 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 KIF20AO95235 890 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 LDHAP00338 332 aaKnown RBP16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 HAPLN1P10915 354 aaPredicted RBP16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 ADSSP30520 456 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 AVPR1AP37288 418 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 GRSF1Q12849 480 aaKnown RBP eCLIP16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 BFSP1Q12934 665 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 STK4Q13043 487 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 PNOCQ13519 176 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 RUNX3Q13761 415 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 KCNB1Q14721 858 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 BMT2Q1RMZ1 405 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 AASDHQ4L235 1098 aaPredicted RBP16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 TRIM68Q6AZZ1 485 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 PKN3Q6P5Z2 889 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 CLEC17AQ6ZS10 378 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 WDR5BQ86VZ2 330 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 SYNPOQ8N3V7 929 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 KIAA0895Q8NCT3 520 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 SPPL2BQ8TCT7 592 aa16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 NOC3LQ8WTT2 800 aaKnown RBP16.7■□□□□ 0.26
SNRNP48-203ENST00000634363 SDK1Q7Z5N4 2213 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 KPNA7A9QM74 516 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 GOLGA6L22H0YM25 854 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 CCDC192P0DO97 292 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 WEE1P30291 646 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 SNRPFP62306 86 aaKnown RBP16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 SF3A2Q15428 464 aaKnown RBP16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 KNOP1Q1ED39 458 aaKnown RBP16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 TXNDC8Q6A555 127 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 IL31Q6EBC2 164 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 DCP1BQ8IZD4 617 aaKnown RBP16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 STKLD1Q8NE28 680 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 GOLGA5Q8TBA6 731 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 C2orf15Q8WU43 125 aaKnown RBP16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 SMARCE1Q969G3 411 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 SAAL1Q96ER3 474 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 CBWD1Q9BRT8 395 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 FAM213AQ9BRX8 229 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 PI4K2AQ9BTU6 479 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 PCIF1Q9H4Z3 704 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 CGNQ9P2M7 1197 aaKnown RBP16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 SLC8A2Q9UPR5 921 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 CCL26Q9Y258 94 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 C2CD2Q9Y426 696 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 PCDHB5Q9Y5E4 795 aa16.69■□□□□ 0.26
SNRNP48-203ENST00000634363 OTOL1A6NHN0 477 aaPredicted RBP16.68■□□□□ 0.26
SNRNP48-203ENST00000634363 RPP40O75818 363 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms