RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 SLC44A2Q8IWA5 706 aaPredicted RBP12.22□□□□□ -0.45
SHPRH-211ENST00000629427 KIRREL3Q8IZU9 778 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 CMTM5Q96DZ9 223 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 CYFIP2Q96F07 1278 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 PALMDQ9NP74 551 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 RIC8BQ9NVN3 520 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 TRIM10Q9UDY6 481 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 TBX20Q9UMR3 447 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 ARL2BPQ9Y2Y0 163 aa12.22□□□□□ -0.45
SHPRH-211ENST00000629427 F8W810 466 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 UBE2Q2LH0YL09 131 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 STX7O15400 261 aaKnown RBP12.21□□□□□ -0.45
SHPRH-211ENST00000629427 MTSS1O43312 755 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 DPEP1P16444 411 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 COMTP21964 271 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 PLCL1Q15111 1095 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 FAM83EQ2M2I3 478 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 AASDHQ4L235 1098 aaPredicted RBP12.21□□□□□ -0.45
SHPRH-211ENST00000629427 MRPS31Q92665 395 aaKnown RBP12.21□□□□□ -0.45
SHPRH-211ENST00000629427 TAAR1Q96RJ0 339 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 NIF3L1Q9GZT8 377 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 RANBP17Q9H2T7 1088 aaKnown RBP12.21□□□□□ -0.45
SHPRH-211ENST00000629427 MAP10Q9P2G4 905 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.21□□□□□ -0.45
SHPRH-211ENST00000629427 SYNCRIPO60506 623 aaKnown RBP12.21□□□□□ -0.45
SHPRH-211ENST00000629427 SLC2A3P11169 496 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 PRIM2P49643 509 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 PLIN5Q00G26 463 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 PRPF39Q86UA1 669 aaKnown RBP12.21□□□□□ -0.45
SHPRH-211ENST00000629427 ZNF614Q8N883 585 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 PPP1R14AQ96A00 147 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 ZNF669Q96BR6 464 aaPredicted RBP12.21□□□□□ -0.45
SHPRH-211ENST00000629427 ATG4CQ96DT6 458 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 VPS50Q96JG6 964 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 CHST12Q9NRB3 414 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 NMRK1Q9NWW6 199 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 PLA2R1Q13018 1463 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 APOA4P06727 396 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 CKMP06732 381 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 RPS6P62753 249 aaKnown RBP12.21□□□□□ -0.45
SHPRH-211ENST00000629427 ORC1Q13415 861 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 NAB2Q15742 525 aa12.21□□□□□ -0.45
SHPRH-211ENST00000629427 COPS7BQ9H9Q2 264 aaPredicted RBP12.21□□□□□ -0.45
SHPRH-211ENST00000629427 DYRK3O43781 588 aa12.21□□□□□ -0.46
SHPRH-211ENST00000629427 ANXA9O76027 345 aa12.21□□□□□ -0.46
SHPRH-211ENST00000629427 ERVK-10P10266 1014 aa12.21□□□□□ -0.46
SHPRH-211ENST00000629427 RPS12P25398 132 aaKnown RBP12.21□□□□□ -0.46
SHPRH-211ENST00000629427 CNTN1Q12860 1018 aa12.21□□□□□ -0.46
SHPRH-211ENST00000629427 KIAA2013Q8IYS2 634 aa12.21□□□□□ -0.46
SHPRH-211ENST00000629427 KRT84Q9NSB2 600 aa12.21□□□□□ -0.46
SHPRH-211ENST00000629427 GRID1Q9ULK0 1009 aa12.21□□□□□ -0.46
SHPRH-211ENST00000629427 NCF1BA6NI72 391 aaPredicted RBP12.21□□□□□ -0.46
SHPRH-211ENST00000629427 NCF1CA8MVU1 366 aaPredicted RBP12.21□□□□□ -0.46
SHPRH-211ENST00000629427 CDH16O75309 829 aa12.21□□□□□ -0.46
SHPRH-211ENST00000629427 SOAT2O75908 522 aa12.21□□□□□ -0.46
SHPRH-211ENST00000629427 SNRPAP09012 282 aaKnown RBP12.21□□□□□ -0.46
SHPRH-211ENST00000629427 NCF1P14598 390 aaPredicted RBP12.21□□□□□ -0.46
SHPRH-211ENST00000629427 C16orf96A6NNT2 1141 aa12.21□□□□□ -0.46
SHPRH-211ENST00000629427 AGTP01019 485 aa12.21□□□□□ -0.46
SHPRH-211ENST00000629427 SNRPFP62306 86 aaKnown RBP12.21□□□□□ -0.46
SHPRH-211ENST00000629427 PLOD1Q02809 727 aaPredicted RBP12.21□□□□□ -0.46
SHPRH-211ENST00000629427 VPS72Q15906 364 aa12.21□□□□□ -0.46
SHPRH-211ENST00000629427 MIB1Q86YT6 1006 aa12.21□□□□□ -0.46
SHPRH-211ENST00000629427 C1orf131Q8NDD1 294 aaKnown RBP12.21□□□□□ -0.46
SHPRH-211ENST00000629427 IPPQ9Y573 584 aa12.21□□□□□ -0.46
SHPRH-211ENST00000629427 PDS5AQ29RF7 1337 aaKnown RBP12.2□□□□□ -0.46
SHPRH-211ENST00000629427 CYB561D2O14569 222 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 DAB1O75553 588 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 KLHL2O95198 593 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 TGM2P21980 687 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 MAGEA4P43358 317 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 DDX39BQ13838 428 aaKnown RBP12.2□□□□□ -0.46
SHPRH-211ENST00000629427 STOX1Q6ZVD7 989 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 PHACTR4Q8IZ21 702 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 RUBCNQ92622 972 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 GPC1P35052 558 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 OTOAQ7RTW8 1153 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 ZNF677Q86XU0 584 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 PLA2G12BQ9BX93 195 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 JMJD4Q9H9V9 463 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 ANKEF1Q9NU02 776 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 CHORDC1Q9UHD1 332 aaPredicted RBP12.2□□□□□ -0.46
SHPRH-211ENST00000629427 TULP4Q9NRJ4 1543 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 ZNF609O15014 1411 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 GAS2O43903 313 aaKnown RBP12.2□□□□□ -0.46
SHPRH-211ENST00000629427 HPGDP15428 266 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 DNAJB2P25686 324 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 SF3B3Q15393 1217 aaKnown RBP12.2□□□□□ -0.46
SHPRH-211ENST00000629427 CHI3L2Q15782 390 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 KAT2BQ92831 832 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 THAP11Q96EK4 314 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 SCN3BQ9NY72 215 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 VPS9D1Q9Y2B5 631 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 TARBP1Q13395 1621 aaKnown RBP12.2□□□□□ -0.46
SHPRH-211ENST00000629427 GALNTL6Q49A17 601 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 ALFQ53S48 1182 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 ARRDC4Q8NCT1 418 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 OPTNQ96CV9 577 aa12.2□□□□□ -0.46
SHPRH-211ENST00000629427 KRCC1Q9NPI7 259 aaPredicted RBP12.2□□□□□ -0.46
SHPRH-211ENST00000629427 GTF2A1LQ9UNN4 478 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms