RNA–Protein interactions for RNA: ENST00000627740.1

APLF-207, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 5

Gene APLF, Length 2,180 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-207ENST00000627740 TFAP2BQ92481 460 aa10.52□□□□□ -0.73
APLF-207ENST00000627740 PCED1BQ96HM7 432 aa10.52□□□□□ -0.73
APLF-207ENST00000627740 FUBP3Q96I24 572 aaKnown RBP eCLIP10.52□□□□□ -0.73
APLF-207ENST00000627740 PPP1R9BQ96SB3 815 aa10.52□□□□□ -0.73
APLF-207ENST00000627740 HNRNPABQ99729 332 aaKnown RBP10.52□□□□□ -0.73
APLF-207ENST00000627740 PDCL3Q9H2J4 239 aa10.52□□□□□ -0.73
APLF-207ENST00000627740 HAUS4Q9H6D7 363 aa10.52□□□□□ -0.73
APLF-207ENST00000627740 HESX1Q9UBX0 185 aa10.52□□□□□ -0.73
APLF-207ENST00000627740 NOCTQ9UK39 431 aaKnown RBP10.52□□□□□ -0.73
APLF-207ENST00000627740 MAFFQ9ULX9 164 aa10.52□□□□□ -0.73
APLF-207ENST00000627740 PCDHB5Q9Y5E4 795 aa10.52□□□□□ -0.73
APLF-207ENST00000627740 HIDE1A8MVS5 230 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 O00370 1275 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 NRDCO43847 1150 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 CSPG5O95196 566 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 CALCAP01258 141 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 SKILP12757 684 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 ANXA13P27216 316 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 SLC8A3P57103 927 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 TAF3Q5VWG9 929 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 HGSNATQ68CP4 663 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 LCLAT1Q6UWP7 414 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 CYP26C1Q6V0L0 522 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 GLYCTKQ8IVS8 523 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 FUKQ8N0W3 1084 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 CCDC112Q8NEF3 446 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 ZNF461Q8TAF7 563 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 SPPL2BQ8TCT7 592 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 DDX1Q92499 740 aaKnown RBP10.51□□□□□ -0.73
APLF-207ENST00000627740 MRPL38Q96DV4 380 aaKnown RBP10.51□□□□□ -0.73
APLF-207ENST00000627740 SMARCD1Q96GM5 515 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 KLHL5Q96PQ7 755 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 AGPAT1Q99943 283 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 LPIN3Q9BQK8 851 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 B3GNT5Q9BYG0 378 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 DEF6Q9H4E7 631 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 ABCB6Q9NP58 842 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 AFF4Q9UHB7 1163 aaKnown RBP10.51□□□□□ -0.73
APLF-207ENST00000627740 TSPAN16Q9UKR8 245 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 PCDHGC3Q9UN70 934 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.51□□□□□ -0.73
APLF-207ENST00000627740 CEP83Q9Y592 693 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 PATJQ8NI35 1801 aa10.51□□□□□ -0.73
APLF-207ENST00000627740 SSU72P8A0A1W2PR75 194 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 WDR27A2RRH5 827 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 M0QYV0 167 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 ADAM12O43184 909 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 ABLIM3O94929 683 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 C1RP00736 705 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 KLRC2P26717 231 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 ADORA2BP29275 332 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 IRS1P35568 1242 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 GOLGA7BQ2TAP0 167 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 CFAP221Q4G0U5 840 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 ZNF697Q5TEC3 545 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 TRIM72Q6ZMU5 477 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 FAM35AQ86V20 835 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 TMTC1Q8IUR5 882 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 ANKRD52Q8NB46 1076 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 SLC20A1Q8WUM9 679 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 PPP2R3CQ969Q6 453 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 BAG1Q99933 345 aaPredicted RBP10.5□□□□□ -0.73
APLF-207ENST00000627740 ZSWIM1Q9BR11 485 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 SEPT11Q9NVA2 429 aaKnown RBP10.5□□□□□ -0.73
APLF-207ENST00000627740 TMLHEQ9NVH6 421 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 ABI2Q9NYB9 513 aaPredicted RBP10.5□□□□□ -0.73
APLF-207ENST00000627740 ARHGAP20Q9P2F6 1191 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 MTMR11A4FU01 709 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 MICAL2O94851 1124 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 LSM8O95777 96 aaKnown RBP10.5□□□□□ -0.73
APLF-207ENST00000627740 MMEP08473 750 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 FAM200BP0CF97 657 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 TNFAIP3P21580 790 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 FECHP22830 423 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 BCAT1P54687 386 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 FMO1Q01740 532 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 MAPK8IP2Q13387 824 aaPredicted RBP10.5□□□□□ -0.73
APLF-207ENST00000627740 CCDC142Q17RM4 750 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 RNF19BQ6ZMZ0 732 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 ZNF571Q7Z3V5 609 aaPredicted RBP10.5□□□□□ -0.73
APLF-207ENST00000627740 CCDC42Q96M95 316 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 PGLYRP2Q96PD5 576 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 DUSP16Q9BY84 665 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 NHEJ1Q9H9Q4 299 aaPredicted RBP10.5□□□□□ -0.73
APLF-207ENST00000627740 KRT82Q9NSB4 513 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 LMCD1Q9NZU5 365 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 HSFX1Q9UBD0 423 aa10.5□□□□□ -0.73
APLF-207ENST00000627740 RFXAPO00287 272 aa10.49□□□□□ -0.73
APLF-207ENST00000627740 CLDN5O00501 218 aa10.49□□□□□ -0.73
APLF-207ENST00000627740 SOX1O00570 391 aaPredicted RBP10.49□□□□□ -0.73
APLF-207ENST00000627740 AP1G2O75843 785 aa10.49□□□□□ -0.73
APLF-207ENST00000627740 GLUD1P00367 558 aa10.49□□□□□ -0.73
APLF-207ENST00000627740 PLEKP08567 350 aaPredicted RBP10.49□□□□□ -0.73
APLF-207ENST00000627740 SETSIPP0DME0 302 aa10.49□□□□□ -0.73
APLF-207ENST00000627740 ATF2P15336 505 aa10.49□□□□□ -0.73
APLF-207ENST00000627740 NPR3P17342 541 aa10.49□□□□□ -0.73
APLF-207ENST00000627740 CHRNB2P17787 502 aa10.49□□□□□ -0.73
APLF-207ENST00000627740 BDNFP23560 247 aa10.49□□□□□ -0.73
APLF-207ENST00000627740 ELF1P32519 619 aa10.49□□□□□ -0.73
APLF-207ENST00000627740 EIF4A3P38919 411 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms