RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 METTL5Q9NRN9 209 aaKnown RBP23.26■■□□□ 1.31
PNKP-220ENST00000627232 GTF2IRD1Q9UHL9 959 aa23.26■■□□□ 1.31
PNKP-220ENST00000627232 PTPN22Q9Y2R2 807 aa23.26■■□□□ 1.31
PNKP-220ENST00000627232 M0QZ92 97 aa23.25■■□□□ 1.31
PNKP-220ENST00000627232 TJP3O95049 919 aa23.25■■□□□ 1.31
PNKP-220ENST00000627232 RPLP2P05387 115 aaKnown RBP23.25■■□□□ 1.31
PNKP-220ENST00000627232 KRT7P08729 469 aa23.25■■□□□ 1.31
PNKP-220ENST00000627232 TCF4P15884 667 aa23.25■■□□□ 1.31
PNKP-220ENST00000627232 LLGL1Q15334 1064 aa23.25■■□□□ 1.31
PNKP-220ENST00000627232 GLRA4Q5JXX5 417 aa23.25■■□□□ 1.31
PNKP-220ENST00000627232 FBXO47Q5MNV8 452 aa23.25■■□□□ 1.31
PNKP-220ENST00000627232 RSPH3Q86UC2 560 aa23.25■■□□□ 1.31
PNKP-220ENST00000627232 ARL8AQ96BM9 186 aa23.25■■□□□ 1.31
PNKP-220ENST00000627232 DNAI2Q9GZS0 605 aa23.25■■□□□ 1.31
PNKP-220ENST00000627232 GDAP2Q9NXN4 497 aa23.25■■□□□ 1.31
PNKP-220ENST00000627232 ABT1Q9ULW3 272 aaKnown RBP23.25■■□□□ 1.31
PNKP-220ENST00000627232 EFR3BQ9Y2G0 817 aa23.25■■□□□ 1.31
PNKP-220ENST00000627232 R3HDM2Q9Y2K5 976 aaKnown RBP23.25■■□□□ 1.31
PNKP-220ENST00000627232 IPPQ9Y573 584 aa23.25■■□□□ 1.31
PNKP-220ENST00000627232 TRPV2Q9Y5S1 764 aa23.25■■□□□ 1.31
PNKP-220ENST00000627232 KRT14P02533 472 aa23.24■■□□□ 1.31
PNKP-220ENST00000627232 LMNB2Q03252 620 aa23.24■■□□□ 1.31
PNKP-220ENST00000627232 CALCOCO2Q13137 446 aa23.24■■□□□ 1.31
PNKP-220ENST00000627232 GOLGA7BQ2TAP0 167 aa23.24■■□□□ 1.31
PNKP-220ENST00000627232 ATP13A4Q4VNC1 1196 aa23.24■■□□□ 1.31
PNKP-220ENST00000627232 PKDCCQ504Y2 493 aa23.24■■□□□ 1.31
PNKP-220ENST00000627232 ODF2Q5BJF6 829 aa23.24■■□□□ 1.31
PNKP-220ENST00000627232 ZFYVE27Q5T4F4 411 aa23.24■■□□□ 1.31
PNKP-220ENST00000627232 ARHGAP17Q68EM7 881 aa23.24■■□□□ 1.31
PNKP-220ENST00000627232 DRICH1Q6PGQ1 229 aaPredicted RBP23.24■■□□□ 1.31
PNKP-220ENST00000627232 MFSD7Q6UXD7 560 aa23.24■■□□□ 1.31
PNKP-220ENST00000627232 FAM228AQ86W67 206 aa23.24■■□□□ 1.31
PNKP-220ENST00000627232 SMG8Q8ND04 991 aaKnown RBP23.24■■□□□ 1.31
PNKP-220ENST00000627232 UBA3Q8TBC4 463 aa23.24■■□□□ 1.31
PNKP-220ENST00000627232 ATG4AQ8WYN0 398 aa23.24■■□□□ 1.31
PNKP-220ENST00000627232 TMBIM4Q9HC24 238 aa23.24■■□□□ 1.31
PNKP-220ENST00000627232 DCAF8L1A6NGE4 600 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 SEPT4O43236 478 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 PFKMP08237 780 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 ITIH2P19823 946 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 EIF3BP55884 814 aaKnown RBP23.23■■□□□ 1.31
PNKP-220ENST00000627232 SNX16P57768 344 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 SLC25A11Q02978 314 aaKnown RBP23.23■■□□□ 1.31
PNKP-220ENST00000627232 NBPF20Q3BBV1 942 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 TFDP3Q5H9I0 405 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 CEP85LQ5SZL2 805 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 ANKS1BQ7Z6G8 1248 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 ASNSD1Q9NWL6 643 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 GABRQQ9UN88 632 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 hCG_1818297A0A087WSY0 165 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 GOLGA6L10A6NI86 522 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 HMGB1P1B2RPK0 211 aaPredicted RBP23.23■■□□□ 1.31
PNKP-220ENST00000627232 LRCH4O75427 683 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 CAPN15O75808 1086 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 FLT3LGP49771 235 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 PMS2P54278 862 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 CAV1Q03135 178 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 SLMAPQ14BN4 828 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 SOWAHAQ2M3V2 549 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 SV2CQ496J9 727 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 PPP1R26Q5T8A7 1209 aaPredicted RBP23.23■■□□□ 1.31
PNKP-220ENST00000627232 LIMS2Q7Z4I7 341 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 ACOT1Q86TX2 421 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 RPAINQ86UA6 219 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 ARFGAP1Q8N6T3 406 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 STK32AQ8WU08 396 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 SNF8Q96H20 258 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 ZIC5Q96T25 663 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 ARHGAP39Q9C0H5 1083 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 RNF39Q9H2S5 420 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 KLHL11Q9NVR0 708 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 KLK14Q9P0G3 267 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 ATP8A1Q9Y2Q0 1164 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 NEU2Q9Y3R4 380 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 CDY2AQ9Y6F7 541 aa23.23■■□□□ 1.31
PNKP-220ENST00000627232 KPNA7A9QM74 516 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 PI4K2BG5E9Z4 385 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 RARBP10826 455 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 CDKN2BP42772 138 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 LMAN1P49257 510 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 TAF6P49848 677 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 KCTD19Q17RG1 926 aaPredicted RBP23.22■■□□□ 1.31
PNKP-220ENST00000627232 FAM102AQ5T9C2 384 aaPredicted RBP23.22■■□□□ 1.31
PNKP-220ENST00000627232 TXNRD3NBQ6F5E7 133 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 TWF2Q6IBS0 349 aaKnown RBP23.22■■□□□ 1.31
PNKP-220ENST00000627232 DPH6Q7L8W6 267 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 CRYBG2Q8N1P7 616 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 BBOF1Q8ND07 529 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 OR6B3Q8NGW1 331 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 RAPGEF5Q92565 580 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 ATP6V1G3Q96LB4 118 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 SLC4A5Q9BY07 1137 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 PABPC3Q9H361 631 aaKnown RBP23.22■■□□□ 1.31
PNKP-220ENST00000627232 HESX1Q9UBX0 185 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 ASIC3Q9UHC3 531 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 NME7Q9Y5B8 376 aa23.22■■□□□ 1.31
PNKP-220ENST00000627232 RNF8O76064 485 aa23.21■■□□□ 1.31
PNKP-220ENST00000627232 FAM163BP0C2L3 166 aa23.21■■□□□ 1.31
PNKP-220ENST00000627232 MYZAPP0CAP1 466 aa23.21■■□□□ 1.31
PNKP-220ENST00000627232 IVDP26440 423 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms