RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 DDX6P26196 483 aaKnown RBP eCLIP14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 PPP3CCP48454 512 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 PSMC1P62191 440 aaKnown RBP14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 CBWD6Q4V339 395 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 MDH1BQ5I0G3 518 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 CBWD3Q5JTY5 395 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 PRSS36Q5K4E3 855 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 CBWD5Q5RIA9 395 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 SCARA5Q6ZMJ2 495 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 NPAS3Q8IXF0 933 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 JAKMIP2Q96AA8 810 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 SMARCD1Q96GM5 515 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 CNOT6LQ96LI5 555 aaKnown RBP14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 C8orf48Q96LL4 319 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 NT5C1BQ96P26 610 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 PI4K2AQ9BTU6 479 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 CRISPLD1Q9H336 500 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 CRTAC1Q9NQ79 661 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 HCFC1R1Q9NWW0 138 aa14.91□□□□□ -0.02
SNRPA1-216ENST00000626000 DOCK8Q8NF50 2099 aa14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 MYL4P12829 197 aa14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 ATF6P18850 670 aa14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 EEF1GP26641 437 aaKnown RBP14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 GRIK1P39086 918 aa14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 PDE6CP51160 858 aa14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 NDST1P52848 882 aa14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 KCNH2Q12809 1159 aa14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 TDGQ13569 410 aa14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 SKOR2Q2VWA4 1001 aaPredicted RBP14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 SCARA3Q6AZY7 606 aa14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 ANKRD20A12PQ8NF67 263 aa14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 ENOX1Q8TC92 643 aaKnown RBP14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 MYRFLQ96LU7 910 aa14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 MYADMQ96S97 322 aa14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 DNAJC25Q9H1X3 360 aa14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 CD320Q9NPF0 282 aa14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 TMLHEQ9NVH6 421 aa14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 LIMD1Q9UGP4 676 aa14.9□□□□□ -0.02
SNRPA1-216ENST00000626000 C5orf42Q9H799 3197 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 ANHXE9PGG2 379 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 CILPO75339 1184 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 NOL4O94818 638 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 PFKLP17858 780 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 SP100P23497 879 aaPredicted RBP14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 CYP2F1P24903 491 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 MTIF2P46199 727 aaKnown RBP14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 CDH8P55286 799 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 SLC8A3P57103 927 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 NTHL1P78549 312 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 GCNT1Q02742 428 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 CUL2Q13617 745 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 MAN2A1Q16706 1144 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 KLHL40Q2TBA0 621 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 SPOPLQ6IQ16 392 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 ENOSF1Q7L5Y1 443 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 SCN4BQ8IWT1 228 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 TTC9BQ8N6N2 239 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 EDAQ92838 391 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 KCNK12Q9HB15 430 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 DMAP1Q9NPF5 467 aaPredicted RBP14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 COMMD8Q9NX08 183 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 MUTYHQ9UIF7 546 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 KIAA1257Q9ULG3 409 aa14.89□□□□□ -0.03
SNRPA1-216ENST00000626000 PTPRDP23468 1912 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 ATP2C2O75185 946 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 ECI2O75521 394 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 RTN3O95197 1032 aaPredicted RBP14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 BDNFP23560 247 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 GABRR2P28476 465 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 WEE1P30291 646 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 RAP1GAPP47736 663 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 HTR4Q13639 388 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 SLC5A9Q2M3M2 681 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 DENND5BQ6ZUT9 1274 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 ACOT1Q86TX2 421 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 TMC8Q8IU68 726 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 ITFG1Q8TB96 612 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 MRPS31Q92665 395 aaKnown RBP14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 SEMA4DQ92854 862 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 SMARCD2Q92925 531 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 MED10Q9BTT4 135 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 LRRC3Q9BY71 257 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 SDCBP2Q9H190 292 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 ATXN3LQ9H3M9 355 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 SLITRK6Q9H5Y7 841 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 TRPV4Q9HBA0 871 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 APOBEC3GQ9HC16 384 aaKnown RBP14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 PNPLA8Q9NP80 782 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 CISHQ9NSE2 258 aa14.88□□□□□ -0.03
SNRPA1-216ENST00000626000 NOTCH4Q99466 2003 aa14.87□□□□□ -0.03
SNRPA1-216ENST00000626000 SLC38A8A6NNN8 435 aa14.87□□□□□ -0.03
SNRPA1-216ENST00000626000 ZXDAP98168 799 aa14.87□□□□□ -0.03
SNRPA1-216ENST00000626000 PFKPQ01813 784 aa14.87□□□□□ -0.03
SNRPA1-216ENST00000626000 SIGLEC14Q08ET2 396 aa14.87□□□□□ -0.03
SNRPA1-216ENST00000626000 GBP6Q6ZN66 633 aa14.87□□□□□ -0.03
SNRPA1-216ENST00000626000 FAM35AQ86V20 835 aa14.87□□□□□ -0.03
SNRPA1-216ENST00000626000 CREBRFQ8IUR6 639 aa14.87□□□□□ -0.03
SNRPA1-216ENST00000626000 PDZD8Q8NEN9 1154 aa14.87□□□□□ -0.03
SNRPA1-216ENST00000626000 DEPDC1BQ8WUY9 529 aa14.87□□□□□ -0.03
SNRPA1-216ENST00000626000 OVCA2Q8WZ82 227 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms