RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 KLHL8Q9P2G9 620 aaPredicted RBP12.32□□□□□ -0.44
ATRX-214ENST00000624166 ESRRBO95718 433 aa12.32□□□□□ -0.44
ATRX-214ENST00000624166 NPR1P16066 1061 aa12.32□□□□□ -0.44
ATRX-214ENST00000624166 SSTR1P30872 391 aa12.32□□□□□ -0.44
ATRX-214ENST00000624166 NFIXQ14938 502 aa12.32□□□□□ -0.44
ATRX-214ENST00000624166 NFIL3Q16649 462 aa12.32□□□□□ -0.44
ATRX-214ENST00000624166 C4orf50Q6ZRC1 276 aa12.32□□□□□ -0.44
ATRX-214ENST00000624166 OTOAQ7RTW8 1153 aa12.32□□□□□ -0.44
ATRX-214ENST00000624166 SP8Q8IXZ3 490 aa12.32□□□□□ -0.44
ATRX-214ENST00000624166 ACTL9Q8TC94 416 aa12.32□□□□□ -0.44
ATRX-214ENST00000624166 ZMAT2Q96NC0 199 aaKnown RBP12.32□□□□□ -0.44
ATRX-214ENST00000624166 MRPL4Q9BYD3 311 aaKnown RBP12.32□□□□□ -0.44
ATRX-214ENST00000624166 MRPL1Q9BYD6 325 aaKnown RBP12.32□□□□□ -0.44
ATRX-214ENST00000624166 ASCC2Q9H1I8 757 aaPredicted RBP12.32□□□□□ -0.44
ATRX-214ENST00000624166 STX18Q9P2W9 335 aaKnown RBP12.32□□□□□ -0.44
ATRX-214ENST00000624166 DRG1Q9Y295 367 aaKnown RBP12.32□□□□□ -0.44
ATRX-214ENST00000624166 TSHRP16473 764 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 IL10P22301 178 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 SERPINB8P50452 374 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 HDAC4P56524 1084 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 OSTNP61366 133 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 ECM1Q16610 540 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 GPAT2Q6NUI2 795 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 C1orf186Q6ZWK4 172 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 ABRAQ8N0Z2 381 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 CCNYL1Q8N7R7 359 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 C12orf50Q8NA57 414 aaPredicted RBP12.31□□□□□ -0.44
ATRX-214ENST00000624166 L3MBTL3Q96JM7 780 aaPredicted RBP12.31□□□□□ -0.44
ATRX-214ENST00000624166 DNPEPQ9ULA0 475 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 TPBGLP0DKB5 382 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 ADRA2BP18089 450 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 ACTR2P61160 394 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 C2CD6Q53TS8 623 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 ZDHHC24Q6UX98 284 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 CLNKQ7Z7G1 428 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 GALNT15Q8N3T1 639 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 GDPD5Q8WTR4 605 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 VPS39Q96JC1 886 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 CNBD2Q96M20 576 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 PHACTR1Q9C0D0 580 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 ING2Q9H160 280 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 KCNH7Q9NS40 1196 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 GTSE1Q9NYZ3 720 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 DCDC2Q9UHG0 476 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 SYNJ2BP-COX16A0A087WUM0 186 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 TNFAIP8O95379 198 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 GH1P01241 217 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 SPRP35270 261 aaPredicted RBP12.31□□□□□ -0.44
ATRX-214ENST00000624166 BTKQ06187 659 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 OTOP1Q7RTM1 612 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 TDRD3Q9H7E2 651 aaKnown RBP12.31□□□□□ -0.44
ATRX-214ENST00000624166 THAP1Q9NVV9 213 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 COX16Q9P0S2 106 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 ARMCX1Q9P291 453 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 NR2E1Q9Y466 385 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 FAM86B1E9PN63 330 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 GSC2O15499 205 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 LSM8O95777 96 aaKnown RBP12.31□□□□□ -0.44
ATRX-214ENST00000624166 FAM86B2P0C5J1 330 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 PDGFRAP16234 1089 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 PSMC3P17980 439 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 SMTNL2Q2TAL5 461 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 ARSHQ5FYA8 562 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 SHC3Q92529 594 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 GMCL1Q96IK5 515 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 SRPK1Q96SB4 655 aaKnown RBP12.31□□□□□ -0.44
ATRX-214ENST00000624166 KIFC3Q9BVG8 833 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 DNAJC16Q9Y2G8 782 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 ORC6Q9Y5N6 252 aa12.31□□□□□ -0.44
ATRX-214ENST00000624166 TGFB1I1O43294 461 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 SRGAP2CP0DJJ0 459 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 ANPEPP15144 967 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 STMN1P16949 149 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 CYP24A1Q07973 514 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 SYCP2LQ5T4T6 812 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 DCAF15Q66K64 600 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 C7orf31Q8N865 590 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 RDM1Q8NG50 284 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 NSUN6Q8TEA1 469 aaKnown RBP12.3□□□□□ -0.44
ATRX-214ENST00000624166 FAM163AQ96GL9 167 aaPredicted RBP12.3□□□□□ -0.44
ATRX-214ENST00000624166 NIF3L1Q9GZT8 377 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 MRPL46Q9H2W6 279 aaKnown RBP12.3□□□□□ -0.44
ATRX-214ENST00000624166 DENND2DQ9H6A0 471 aaPredicted RBP12.3□□□□□ -0.44
ATRX-214ENST00000624166 NRDE2Q9H7Z3 1164 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 WARS2Q9UGM6 360 aaKnown RBP12.3□□□□□ -0.44
ATRX-214ENST00000624166 GINS2Q9Y248 185 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 MROH7Q68CQ1 1323 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 CIITAP33076 1130 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 EFNA5P52803 228 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 SESN2P58004 480 aaPredicted RBP12.3□□□□□ -0.44
ATRX-214ENST00000624166 PPP3CAQ08209 521 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 XKR3Q5GH77 459 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 AAGABQ6PD74 315 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 TTC16Q8NEE8 873 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 ZNF483Q8TF39 744 aaPredicted RBP12.3□□□□□ -0.44
ATRX-214ENST00000624166 SNRNP27Q8WVK2 155 aaKnown RBP12.3□□□□□ -0.44
ATRX-214ENST00000624166 CLMNQ96JQ2 1002 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 ECSITQ9BQ95 431 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 FGFBP2Q9BYJ0 223 aa12.3□□□□□ -0.44
ATRX-214ENST00000624166 ZNF341Q9BYN7 854 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms