RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 E5RJQ4 531 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 NDC80O14777 642 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 BAG2O95816 211 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 VIL1P09327 827 aaKnown RBP14.8□□□□□ -0.04
LDB3-209ENST00000623056 ETS2P15036 469 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 SSTR3P32745 418 aaPredicted RBP14.8□□□□□ -0.04
LDB3-209ENST00000623056 NCKAP1LP55160 1127 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 PLCB3Q01970 1234 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 PABPC1LQ4VXU2 614 aaKnown RBP14.8□□□□□ -0.04
LDB3-209ENST00000623056 SPOCD1Q6ZMY3 1216 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 SDCCAG8Q86SQ7 713 aaPredicted RBP14.8□□□□□ -0.04
LDB3-209ENST00000623056 RHPN2Q8IUC4 686 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 ULK2Q8IYT8 1036 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 PPP2R3CQ969Q6 453 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 HAPLN3Q96S86 360 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 C1orf112Q9NSG2 853 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 IL1RAPL1Q9NZN1 696 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 PPM1HQ9ULR3 514 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 POLIQ9UNA4 740 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 TBC1D30Q9Y2I9 924 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 COMMD3-BMI1R4GMX3 469 aa14.8□□□□□ -0.04
LDB3-209ENST00000623056 TM7SF2O76062 418 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 IL1BP01584 269 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 ITGAVP06756 1048 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 P4HBP07237 508 aaKnown RBP14.79□□□□□ -0.04
LDB3-209ENST00000623056 GTF2H1P32780 548 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 LSAMPQ13449 338 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 MDH1BQ5I0G3 518 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 C6orf163Q5TEZ5 329 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 MARK2Q7KZI7 788 aaKnown RBP14.79□□□□□ -0.04
LDB3-209ENST00000623056 FBXO36Q8NEA4 188 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 NKD2Q969F2 451 aaPredicted RBP14.79□□□□□ -0.04
LDB3-209ENST00000623056 RBM17Q96I25 401 aaKnown RBP14.79□□□□□ -0.04
LDB3-209ENST00000623056 APOPT1Q96IL0 206 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 SERAC1Q96JX3 654 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 MFSD14AQ96MC6 490 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 CYTH2Q99418 400 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 LMCD1Q9NZU5 365 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 DNAJB4Q9UDY4 337 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 SLC7A8Q9UHI5 535 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 STRIP2Q9ULQ0 834 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 SNCAIPQ9Y6H5 919 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 SCINQ9Y6U3 715 aa14.79□□□□□ -0.04
LDB3-209ENST00000623056 TMEM150BA6NC51 233 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 NOMO3P69849 1222 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 CYP24A1Q07973 514 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 MTM1Q13496 603 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 TATDN1Q6P1N9 297 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 HHIPL2Q6UWX4 724 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 PPIL6Q8IXY8 311 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 ST13P4Q8IZP2 240 aaPredicted RBP14.78□□□□□ -0.04
LDB3-209ENST00000623056 FEZF2Q8TBJ5 459 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 CPT1BQ92523 772 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 TEKT1Q969V4 418 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 OLFM3Q96PB7 478 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 RIT2Q99578 217 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 THTPAQ9BU02 230 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 EBF3Q9H4W6 596 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 CNTN3Q9P232 1028 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 ATXN10Q9UBB4 475 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 TBX20Q9UMR3 447 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 EXOC7Q9UPT5 735 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 IVNS1ABPQ9Y6Y0 642 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 BUD23O43709 281 aaKnown RBP14.78□□□□□ -0.04
LDB3-209ENST00000623056 BPIFB4P59827 614 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 KDSRQ06136 332 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 ABCB5Q2M3G0 1257 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 C1orf146Q5VVC0 180 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 RAPH1Q70E73 1250 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 PCGF5Q86SE9 256 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 PALM2Q8IXS6 379 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 AKT1S1Q96B36 256 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 ACSF2Q96CM8 615 aaPredicted RBP14.78□□□□□ -0.04
LDB3-209ENST00000623056 SENP7Q9BQF6 1050 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 KIFC3Q9BVG8 833 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 COA1Q9GZY4 146 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 PI4KBQ9UBF8 816 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 IP6K2Q9UHH9 426 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 ZBTB21Q9ULJ3 1066 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 PHF24Q9UPV7 400 aa14.78□□□□□ -0.04
LDB3-209ENST00000623056 hCG_1818297A0A087WSY0 165 aa14.77□□□□□ -0.04
LDB3-209ENST00000623056 ZC3H11AO75152 810 aaKnown RBP eCLIP14.77□□□□□ -0.04
LDB3-209ENST00000623056 BBOX1O75936 387 aa14.77□□□□□ -0.04
LDB3-209ENST00000623056 SPATA31D3P0C874 917 aa14.77□□□□□ -0.04
LDB3-209ENST00000623056 PYGBP11216 843 aa14.77□□□□□ -0.04
LDB3-209ENST00000623056 RPL7AP62424 266 aaKnown RBP14.77□□□□□ -0.04
LDB3-209ENST00000623056 JAG1P78504 1218 aa14.77□□□□□ -0.04
LDB3-209ENST00000623056 HSF5Q4G112 596 aaPredicted RBP14.77□□□□□ -0.04
LDB3-209ENST00000623056 CFAP157Q5JU67 520 aa14.77□□□□□ -0.04
LDB3-209ENST00000623056 CIAPIN1Q6FI81 312 aa14.77□□□□□ -0.04
LDB3-209ENST00000623056 SPATA31D4Q6ZUB0 917 aa14.77□□□□□ -0.04
LDB3-209ENST00000623056 ACAD11Q709F0 780 aa14.77□□□□□ -0.04
LDB3-209ENST00000623056 SH3BP5LQ7L8J4 393 aa14.77□□□□□ -0.04
LDB3-209ENST00000623056 PHF13Q86YI8 300 aaPredicted RBP14.77□□□□□ -0.04
LDB3-209ENST00000623056 NAT8LQ8N9F0 302 aa14.77□□□□□ -0.04
LDB3-209ENST00000623056 C10orf88Q9H8K7 445 aa14.77□□□□□ -0.04
LDB3-209ENST00000623056 EHMT1Q9H9B1 1298 aa14.77□□□□□ -0.04
LDB3-209ENST00000623056 GPAMQ9HCL2 828 aa14.77□□□□□ -0.04
LDB3-209ENST00000623056 GINM1Q9NU53 330 aa14.77□□□□□ -0.04
LDB3-209ENST00000623056 KCNK4Q9NYG8 393 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms