RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 HEXIM2Q96MH2 286 aaKnown RBP21.08■□□□□ 0.97
PDLIM2-221ENST00000622702 TMEM209Q96SK2 561 aa21.08■□□□□ 0.97
PDLIM2-221ENST00000622702 CLSTN3Q9BQT9 956 aa21.08■□□□□ 0.97
PDLIM2-221ENST00000622702 ABHD10Q9NUJ1 306 aa21.08■□□□□ 0.97
PDLIM2-221ENST00000622702 CDY1Q9Y6F8 540 aa21.08■□□□□ 0.97
PDLIM2-221ENST00000622702 MYBPHLA2RUH7 354 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 TEX28O15482 410 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 TBX10O75333 385 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 VDRP11473 427 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 GNA15P30679 374 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 PRKCIP41743 596 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 MAPRE1Q15691 268 aaKnown RBP21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 ASIC2Q16515 512 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 LRRTM3Q86VH5 581 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 SLC47A2Q86VL8 602 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 DCP1BQ8IZD4 617 aaKnown RBP21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 HCFC2Q9Y5Z7 792 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 H3BQ06 376 aaPredicted RBP21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 ADAM12O43184 909 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 ADH1AP07327 375 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 CYP11B1P15538 503 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 RPL17P18621 184 aaKnown RBP21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 GSDMDP57764 484 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 GOLGA8FQ08AF8 430 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 GOLGA8DPQ0D2H9 430 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 SMARCB1Q12824 385 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 GPR17Q13304 367 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 KCNC3Q14003 757 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 NFE2Q16621 373 aaPredicted RBP21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 SGO2Q562F6 1265 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 ARHGAP17Q68EM7 881 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 C12orf29Q8N999 325 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 EPS8L1Q8TE68 723 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 TFAP2BQ92481 460 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 ACP6Q9NPH0 428 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 GTF3C4Q9UKN8 822 aa21.07■□□□□ 0.96
PDLIM2-221ENST00000622702 OR4Q2P0C623 313 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 CD19P15391 556 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 OR1D2P34982 312 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 PDE6CP51160 858 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 ROR1Q01973 937 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 ARID5AQ03989 594 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 RAB33AQ14088 237 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 MEA1Q16626 185 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 CCDC142Q17RM4 750 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 TSR1Q2NL82 804 aaKnown RBP21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 MDH1BQ5I0G3 518 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 TMEM184AQ6ZMB5 413 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 GLYCTKQ8IVS8 523 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 SLC22A17Q8WUG5 538 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 ATXN2LQ8WWM7 1075 aaKnown RBP21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 PCED1BQ96HM7 432 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 PANX2Q96RD6 677 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 LPIN3Q9BQK8 851 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 ZSWIM1Q9BR11 485 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 CLEC1BQ9P126 229 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 NOCTQ9UK39 431 aaKnown RBP21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 A0A0C4DFX4 3053 aa21.06■□□□□ 0.96
PDLIM2-221ENST00000622702 O00370 1275 aa21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 SRGAP2BP0DMP2 458 aa21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 CPB1P15086 417 aa21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 EPCAMP16422 314 aa21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 BRD2P25440 801 aaKnown RBP21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 CLCN4P51793 760 aa21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 MRPS5P82675 430 aaKnown RBP21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 STILQ15468 1287 aa21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 CNGA2Q16280 664 aa21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 SLC39A12Q504Y0 691 aa21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 HGSNATQ68CP4 663 aa21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 WDR59Q6PJI9 974 aa21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 ZNF677Q86XU0 584 aa21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 ZNF606Q8WXB4 792 aa21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 DDX1Q92499 740 aaKnown RBP21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 CYFIP2Q96F07 1278 aa21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 HNRNPABQ99729 332 aaKnown RBP21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 FAM49BQ9NUQ9 324 aa21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 TMLHEQ9NVH6 421 aa21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 ZNHIT6Q9NWK9 470 aaKnown RBP21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 BZW2Q9Y6E2 419 aaKnown RBP21.05■□□□□ 0.96
PDLIM2-221ENST00000622702 WDR27A2RRH5 827 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 THAP12O43422 761 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 ABLIM3O94929 683 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 CALCAP01258 141 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 SERPING1P05155 500 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 KLHL30Q0D2K2 578 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 CLUL1Q15846 466 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 AAK1Q2M2I8 961 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 PPP1R26Q5T8A7 1209 aaPredicted RBP21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 TPGS2Q68CL5 300 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 LCLAT1Q6UWP7 414 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 C4orf50Q6ZRC1 276 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 NOP9Q86U38 636 aaKnown RBP21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 PALB2Q86YC2 1186 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 GPIHBP1Q8IV16 184 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 FUKQ8N0W3 1084 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 C2orf15Q8WU43 125 aaKnown RBP21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 CASP10Q92851 521 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 MYLPFQ96A32 169 aa21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 FUBP3Q96I24 572 aaKnown RBP eCLIP21.04■□□□□ 0.96
PDLIM2-221ENST00000622702 B3GNT5Q9BYG0 378 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms