RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 PAX3P23760 479 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 CYP2F1P24903 491 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 DDX6P26196 483 aaKnown RBP eCLIP11.79□□□□□ -0.52
LINC00963-214ENST00000622680 ADSSP30520 456 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 GJA4P35212 333 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 GALK1P51570 392 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 LIMK1P53667 647 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 TFAMQ00059 246 aaKnown RBP11.79□□□□□ -0.52
LINC00963-214ENST00000622680 USP4Q13107 963 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 MTF1Q14872 753 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 PTPAQ15257 358 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 ZNF77Q15935 545 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 DDR2Q16832 855 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 STPG1Q5TH74 334 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 CC2D1AQ6P1N0 951 aaPredicted RBP11.79□□□□□ -0.52
LINC00963-214ENST00000622680 USP49Q70CQ1 688 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 OSTM1Q86WC4 334 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 MRPS31Q92665 395 aaKnown RBP11.79□□□□□ -0.52
LINC00963-214ENST00000622680 ANGPTL2Q9UKU9 493 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 WNT6Q9Y6F9 365 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 PCDH15Q96QU1 1955 aa11.79□□□□□ -0.52
LINC00963-214ENST00000622680 PTPRBP23467 1997 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 ANTXRLA6NF34 631 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 TM4SF5O14894 197 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 FOXD2O60548 495 aaPredicted RBP11.78□□□□□ -0.52
LINC00963-214ENST00000622680 IL18RAPO95256 599 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 CSH1P0DML2 217 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 CSH2P0DML3 217 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 PMLP29590 882 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 DDIT3P35638 169 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 LONP1P36776 959 aaKnown RBP11.78□□□□□ -0.52
LINC00963-214ENST00000622680 SMARCB1Q12824 385 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 PSMD2Q13200 908 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 RABEP1Q15276 862 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 SF3A1Q15459 793 aaKnown RBP11.78□□□□□ -0.52
LINC00963-214ENST00000622680 PLK5Q496M5 336 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 INTS6LQ5JSJ4 861 aaKnown RBP11.78□□□□□ -0.52
LINC00963-214ENST00000622680 PLA2G2CQ5R387 149 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 SLFN12LQ6IEE8 588 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 MON1AQ86VX9 555 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 CPA6Q8N4T0 437 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 C1orf127Q8N9H9 656 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 NOC3LQ8WTT2 800 aaKnown RBP11.78□□□□□ -0.52
LINC00963-214ENST00000622680 EPSTI1Q96J88 318 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 LOXL4Q96JB6 756 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 CYP2S1Q96SQ9 504 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 PKMYT1Q99640 499 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 P2RY13Q9BPV8 354 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 FAM213AQ9BRX8 229 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 FGFBP2Q9BYJ0 223 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 DUSP15Q9H1R2 295 aaPredicted RBP11.78□□□□□ -0.52
LINC00963-214ENST00000622680 ST6GALNAC4Q9H4F1 302 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 DDX43Q9NXZ2 648 aaKnown RBP11.78□□□□□ -0.52
LINC00963-214ENST00000622680 ZMYM5Q9UJ78 669 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 RALYQ9UKM9 306 aaKnown RBP11.78□□□□□ -0.52
LINC00963-214ENST00000622680 AGAP1Q9UPQ3 857 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 INVSQ9Y283 1065 aa11.78□□□□□ -0.52
LINC00963-214ENST00000622680 ITPR1Q14643 2758 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 CCDC163A0A0D9SF12 145 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 GOLGA8IPA6NC78 632 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 C2orf78A6NCI8 922 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 GOLGA8JA6NMD2 632 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 ATG13O75143 517 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 NOL4O94818 638 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 CKMP06732 381 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 DRD1P21728 446 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 IFNAR2P48551 515 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 CASP5P51878 434 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 FAM160A1Q05DH4 1040 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 DMC1Q14565 340 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 ZNF268Q14587 947 aaPredicted RBP11.77□□□□□ -0.53
LINC00963-214ENST00000622680 PDGFRLQ15198 375 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 NFE2Q16621 373 aaPredicted RBP11.77□□□□□ -0.53
LINC00963-214ENST00000622680 EML3Q32P44 896 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 LMBRD2Q68DH5 695 aaPredicted RBP11.77□□□□□ -0.53
LINC00963-214ENST00000622680 RNF43Q68DV7 783 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 ZNF720Q7Z2F6 126 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 BRSK2Q8IWQ3 736 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 KRI1Q8N9T8 703 aaKnown RBP11.77□□□□□ -0.53
LINC00963-214ENST00000622680 LEO1Q8WVC0 666 aaPredicted RBP11.77□□□□□ -0.53
LINC00963-214ENST00000622680 DDX1Q92499 740 aaKnown RBP11.77□□□□□ -0.53
LINC00963-214ENST00000622680 ZC3H10Q96K80 434 aaKnown RBP11.77□□□□□ -0.53
LINC00963-214ENST00000622680 EDEM2Q9BV94 578 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 TPSD1Q9BZJ3 242 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 ECT2Q9H8V3 914 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 MRPL44Q9H9J2 332 aaKnown RBP11.77□□□□□ -0.53
LINC00963-214ENST00000622680 DUS2Q9NX74 493 aaKnown RBP11.77□□□□□ -0.53
LINC00963-214ENST00000622680 GTF3C4Q9UKN8 822 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 FREM2Q5SZK8 3169 aa11.77□□□□□ -0.53
LINC00963-214ENST00000622680 TRAV19A0A0A6YYK7 116 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 MYMKA6NI61 221 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 HUS1O60921 280 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 AKAP3O75969 853 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 KCNK5O95279 499 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 APBB3O95704 486 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 KRT19P08727 400 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 GBP1P32455 592 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 ABCD1P33897 745 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 PNPLA4P41247 253 aa11.76□□□□□ -0.53
LINC00963-214ENST00000622680 SEC13P55735 322 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms