RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 C2orf69Q8N8R5 385 aa13.79□□□□□ -0.2
AGAP3-226ENST00000622464 MGARPQ8TDB4 240 aa13.79□□□□□ -0.2
AGAP3-226ENST00000622464 TMEM176AQ96HP8 235 aa13.79□□□□□ -0.2
AGAP3-226ENST00000622464 B3GNT5Q9BYG0 378 aa13.79□□□□□ -0.2
AGAP3-226ENST00000622464 MAGEB5Q9BZ81 275 aa13.79□□□□□ -0.2
AGAP3-226ENST00000622464 HMGB1P1B2RPK0 211 aaPredicted RBP13.78□□□□□ -0.2
AGAP3-226ENST00000622464 E5RJQ4 531 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 ASAP2O43150 1006 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 PSTPIP1O43586 416 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 CILPO75339 1184 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 LRCH4O75427 683 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 MCF2P10911 925 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 CYP2C9P11712 490 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 SURF1Q15526 300 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 TRNP1Q6NT89 227 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 SPOCD1Q6ZMY3 1216 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 KATNAL2Q8IYT4 538 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 MIS12Q9H081 205 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 CXorf56Q9H5V9 222 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 MAGEB2O15479 319 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 FASTKD3Q14CZ7 662 aaKnown RBP13.78□□□□□ -0.2
AGAP3-226ENST00000622464 PPP2R5EQ16537 467 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 IZUMO3Q5VZ72 239 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 OR6B2Q6IFH4 312 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 LRIG3Q6UXM1 1119 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 XYLT1Q86Y38 959 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 NETO2Q8NC67 525 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 KAT2BQ92831 832 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 KCNN1Q92952 543 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 ADPGKQ9BRR6 497 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 CALN1Q9BXU9 219 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 BCO2Q9BYV7 579 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 ABHD16BQ9H3Z7 469 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 ANAPC5Q9UJX4 755 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 TSPAN16Q9UKR8 245 aa13.78□□□□□ -0.2
AGAP3-226ENST00000622464 PIN4Q9Y237 131 aaKnown RBP13.78□□□□□ -0.2
AGAP3-226ENST00000622464 IL18RAPO95256 599 aa13.77□□□□□ -0.2
AGAP3-226ENST00000622464 MDH1P40925 334 aaKnown RBP13.77□□□□□ -0.2
AGAP3-226ENST00000622464 IFNAR2P48551 515 aa13.77□□□□□ -0.2
AGAP3-226ENST00000622464 GDF10P55107 478 aa13.77□□□□□ -0.2
AGAP3-226ENST00000622464 PPP1R15BQ5SWA1 713 aa13.77□□□□□ -0.2
AGAP3-226ENST00000622464 NPNTQ6UXI9 565 aa13.77□□□□□ -0.2
AGAP3-226ENST00000622464 TLK2Q86UE8 772 aa13.77□□□□□ -0.2
AGAP3-226ENST00000622464 C12orf50Q8NA57 414 aaPredicted RBP13.77□□□□□ -0.2
AGAP3-226ENST00000622464 PARK7Q99497 189 aaKnown RBP13.77□□□□□ -0.2
AGAP3-226ENST00000622464 TRIM6Q9C030 488 aaPredicted RBP13.77□□□□□ -0.2
AGAP3-226ENST00000622464 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.77□□□□□ -0.2
AGAP3-226ENST00000622464 CITO14578 2027 aa13.77□□□□□ -0.2
AGAP3-226ENST00000622464 A0A1B0GUA9 196 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 MEIS3P2A8K0S8 358 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 SKOR1P84550 965 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 LRRC14Q15048 493 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 PPP1R26Q5T8A7 1209 aaPredicted RBP13.77□□□□□ -0.21
AGAP3-226ENST00000622464 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.77□□□□□ -0.219e-7■■■■□ 26.7
AGAP3-226ENST00000622464 ANKRD23Q86SG2 305 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 EXOC8Q8IYI6 725 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 C3orf20Q8ND61 904 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 EXD1Q8NHP7 514 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 CLEC4CQ8WTT0 213 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 SNF8Q96H20 258 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 VCPIP1Q96JH7 1222 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 MORF4L1Q9UBU8 362 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 MYADML2A6NDP7 307 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 STRNO43815 780 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 RECQL4O94761 1208 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 GAS8O95995 478 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 GCLCP48506 637 aaPredicted RBP13.77□□□□□ -0.21
AGAP3-226ENST00000622464 TAF1CQ15572 869 aaPredicted RBP13.77□□□□□ -0.21
AGAP3-226ENST00000622464 GOLGA7BQ2TAP0 167 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 SCYL2Q6P3W7 929 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 SCUBE3Q8IX30 993 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 ATL2Q8NHH9 583 aa13.77□□□□□ -0.21
AGAP3-226ENST00000622464 NDRG1Q92597 394 aaKnown RBP13.77□□□□□ -0.21
AGAP3-226ENST00000622464 SGK1O00141 431 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 TFE3P19532 575 aaPredicted RBP13.76□□□□□ -0.21
AGAP3-226ENST00000622464 EIF4BP23588 611 aaKnown RBP13.76□□□□□ -0.21
AGAP3-226ENST00000622464 ADORA2BP29275 332 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 ARSEP51690 589 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 ZNF157P51786 506 aaPredicted RBP13.76□□□□□ -0.21
AGAP3-226ENST00000622464 ATXN1P54253 815 aaKnown RBP13.76□□□□□ -0.21
AGAP3-226ENST00000622464 YWHAEP62258 255 aaKnown RBP13.76□□□□□ -0.21
AGAP3-226ENST00000622464 PPP2R2AP63151 447 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 GPS1Q13098 491 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 EIF1ADQ8N9N8 165 aaKnown RBP13.76□□□□□ -0.21
AGAP3-226ENST00000622464 CFAP57Q96MR6 1250 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 PEBP4Q96S96 227 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 SLC5A4Q9NY91 659 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 PARP2Q9UGN5 583 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 RGS16O15492 202 aaPredicted RBP13.76□□□□□ -0.21
AGAP3-226ENST00000622464 CST8O60676 142 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 LSM8O95777 96 aaKnown RBP13.76□□□□□ -0.21
AGAP3-226ENST00000622464 CTSHP09668 335 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 CCDC130P13994 396 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 BYSLQ13895 437 aaKnown RBP13.76□□□□□ -0.21
AGAP3-226ENST00000622464 QPCTQ16769 361 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 FAM110CQ1W6H9 321 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 FAM183BPQ6ZVS7 135 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 CCDC91Q7Z6B0 441 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 OR6B3Q8NGW1 331 aa13.76□□□□□ -0.21
AGAP3-226ENST00000622464 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms