RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 ZNF394Q53GI3 561 aa19.78■□□□□ 0.76
CIRBP-245ENST00000621399 KAT5Q92993 513 aa19.78■□□□□ 0.76
CIRBP-245ENST00000621399 FUBP3Q96I24 572 aaKnown RBP eCLIP19.78■□□□□ 0.76
CIRBP-245ENST00000621399 TWNKQ96RR1 684 aa19.78■□□□□ 0.76
CIRBP-245ENST00000621399 ELOVL4Q9GZR5 314 aa19.78■□□□□ 0.76
CIRBP-245ENST00000621399 PAPLNO95428 1278 aa19.77■□□□□ 0.76
CIRBP-245ENST00000621399 EPHB3P54753 998 aa19.77■□□□□ 0.76
CIRBP-245ENST00000621399 CBX2Q14781 532 aaPredicted RBP19.77■□□□□ 0.76
CIRBP-245ENST00000621399 CFAP221Q4G0U5 840 aa19.77■□□□□ 0.76
CIRBP-245ENST00000621399 ELMOD1Q8N336 334 aa19.77■□□□□ 0.76
CIRBP-245ENST00000621399 SUSD6Q92537 303 aa19.77■□□□□ 0.76
CIRBP-245ENST00000621399 TMEM176AQ96HP8 235 aa19.77■□□□□ 0.76
CIRBP-245ENST00000621399 ZNF512Q96ME7 567 aaPredicted RBP19.77■□□□□ 0.76
CIRBP-245ENST00000621399 NECTIN4Q96NY8 510 aa19.77■□□□□ 0.76
CIRBP-245ENST00000621399 MED10Q9BTT4 135 aa19.77■□□□□ 0.76
CIRBP-245ENST00000621399 COL25A1Q9BXS0 654 aaPredicted RBP19.77■□□□□ 0.76
CIRBP-245ENST00000621399 B3GNT5Q9BYG0 378 aa19.77■□□□□ 0.76
CIRBP-245ENST00000621399 RHOBTB2Q9BYZ6 727 aa19.77■□□□□ 0.76
CIRBP-245ENST00000621399 APEX2Q9UBZ4 518 aa19.77■□□□□ 0.76
CIRBP-245ENST00000621399 LGALS16A8MUM7 142 aa19.76■□□□□ 0.75
CIRBP-245ENST00000621399 POU2F2P09086 479 aa19.76■□□□□ 0.75
CIRBP-245ENST00000621399 BDNFP23560 247 aa19.76■□□□□ 0.75
CIRBP-245ENST00000621399 MFAP3P55082 362 aa19.76■□□□□ 0.75
CIRBP-245ENST00000621399 ZNF445P59923 1031 aa19.76■□□□□ 0.75
CIRBP-245ENST00000621399 RPL10AP62906 217 aaKnown RBP19.76■□□□□ 0.75
CIRBP-245ENST00000621399 APBA1Q02410 837 aa19.76■□□□□ 0.75
CIRBP-245ENST00000621399 SMAD2Q15796 467 aaKnown RBP19.76■□□□□ 0.75
CIRBP-245ENST00000621399 IQCEQ6IPM2 695 aa19.76■□□□□ 0.75
CIRBP-245ENST00000621399 GJB7Q6PEY0 223 aa19.76■□□□□ 0.75
CIRBP-245ENST00000621399 GRASPQ7Z6J2 395 aaPredicted RBP19.76■□□□□ 0.75
CIRBP-245ENST00000621399 SCN4BQ8IWT1 228 aa19.76■□□□□ 0.75
CIRBP-245ENST00000621399 C12orf29Q8N999 325 aa19.76■□□□□ 0.75
CIRBP-245ENST00000621399 FAM81BQ96LP2 452 aa19.76■□□□□ 0.75
CIRBP-245ENST00000621399 HEXIM2Q96MH2 286 aaKnown RBP19.76■□□□□ 0.75
CIRBP-245ENST00000621399 FAM49BQ9NUQ9 324 aa19.76■□□□□ 0.75
CIRBP-245ENST00000621399 CEP72Q9P209 647 aa19.76■□□□□ 0.75
CIRBP-245ENST00000621399 PCDHB4Q9Y5E5 795 aa19.76■□□□□ 0.75
CIRBP-245ENST00000621399 CLDN5O00501 218 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 IL9P15248 144 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 PTPN2P17706 415 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 ACO1P21399 889 aaKnown RBP19.75■□□□□ 0.75
CIRBP-245ENST00000621399 MAGEA11P43364 429 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 RAD23BP54727 409 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 UBXN1Q04323 297 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 KCNMA1Q12791 1236 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 VEPH1Q14D04 833 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 DDR2Q16832 855 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 TMEM270Q6UE05 265 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 VSTM1Q6UX27 236 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 ENOSF1Q7L5Y1 443 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 APTXQ7Z2E3 356 aaKnown RBP19.75■□□□□ 0.75
CIRBP-245ENST00000621399 UBR7Q8N806 425 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 SLC4A11Q8NBS3 891 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 JAKMIP2Q96AA8 810 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 KREMEN1Q96MU8 473 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 LSM14BQ9BX40 385 aaKnown RBP19.75■□□□□ 0.75
CIRBP-245ENST00000621399 ZNF518BQ9C0D4 1074 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 SIX2Q9NPC8 291 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 ATP8B3O60423 1300 aa19.75■□□□□ 0.75
CIRBP-245ENST00000621399 SERPINC1P01008 464 aa19.74■□□□□ 0.75
CIRBP-245ENST00000621399 BMP1P13497 986 aa19.74■□□□□ 0.75
CIRBP-245ENST00000621399 CCDC130P13994 396 aa19.74■□□□□ 0.75
CIRBP-245ENST00000621399 ATF6P18850 670 aa19.74■□□□□ 0.75
CIRBP-245ENST00000621399 GRIK1P39086 918 aa19.74■□□□□ 0.75
CIRBP-245ENST00000621399 GPR15P49685 360 aa19.74■□□□□ 0.75
CIRBP-245ENST00000621399 FILIP1LQ4L180 1135 aa19.74■□□□□ 0.75
CIRBP-245ENST00000621399 ITIH5Q86UX2 942 aa19.74■□□□□ 0.75
CIRBP-245ENST00000621399 SLC2A14Q8TDB8 520 aa19.74■□□□□ 0.75
CIRBP-245ENST00000621399 GPR152Q8TDT2 470 aa19.74■□□□□ 0.75
CIRBP-245ENST00000621399 GIPC2Q8TF65 315 aa19.74■□□□□ 0.75
CIRBP-245ENST00000621399 CORO1BQ9BR76 489 aa19.74■□□□□ 0.75
CIRBP-245ENST00000621399 POMKQ9H5K3 350 aa19.74■□□□□ 0.75
CIRBP-245ENST00000621399 WDR6Q9NNW5 1121 aaKnown RBP19.74■□□□□ 0.75
CIRBP-245ENST00000621399 HCFC1R1Q9NWW0 138 aa19.74■□□□□ 0.75
CIRBP-245ENST00000621399 DNMT3BQ9UBC3 853 aaKnown RBP19.74■□□□□ 0.75
CIRBP-245ENST00000621399 ASB3Q9Y575 518 aa19.74■□□□□ 0.75
CIRBP-245ENST00000621399 KRT5P13647 590 aa19.73■□□□□ 0.75
CIRBP-245ENST00000621399 NTHL1P78549 312 aa19.73■□□□□ 0.75
CIRBP-245ENST00000621399 TAF12Q16514 161 aa19.73■□□□□ 0.75
CIRBP-245ENST00000621399 ARHGAP44Q17R89 818 aa19.73■□□□□ 0.75
CIRBP-245ENST00000621399 PABPC1LQ4VXU2 614 aaKnown RBP19.73■□□□□ 0.75
CIRBP-245ENST00000621399 SDHAF4Q5VUM1 108 aa19.73■□□□□ 0.75
CIRBP-245ENST00000621399 PAQR9Q6ZVX9 377 aa19.73■□□□□ 0.75
CIRBP-245ENST00000621399 DNAJB7Q7Z6W7 309 aaPredicted RBP19.73■□□□□ 0.75
CIRBP-245ENST00000621399 FAM35AQ86V20 835 aa19.73■□□□□ 0.75
CIRBP-245ENST00000621399 FUKQ8N0W3 1084 aa19.73■□□□□ 0.75
CIRBP-245ENST00000621399 PSMG2Q969U7 264 aa19.73■□□□□ 0.75
CIRBP-245ENST00000621399 CYFIP2Q96F07 1278 aa19.73■□□□□ 0.75
CIRBP-245ENST00000621399 PCMTD1Q96MG8 357 aaPredicted RBP19.73■□□□□ 0.75
CIRBP-245ENST00000621399 DNAJC12Q9UKB3 198 aa19.73■□□□□ 0.75
CIRBP-245ENST00000621399 TRIM66O15016 1216 aa19.72■□□□□ 0.75
CIRBP-245ENST00000621399 VCANP13611 3396 aa19.72■□□□□ 0.75
CIRBP-245ENST00000621399 CD19P15391 556 aa19.72■□□□□ 0.75
CIRBP-245ENST00000621399 ANXA13P27216 316 aa19.72■□□□□ 0.75
CIRBP-245ENST00000621399 ADORA2BP29275 332 aa19.72■□□□□ 0.75
CIRBP-245ENST00000621399 KLK7P49862 253 aa19.72■□□□□ 0.75
CIRBP-245ENST00000621399 SYCP1Q15431 976 aa19.72■□□□□ 0.75
CIRBP-245ENST00000621399 TJAP1Q5JTD0 557 aa19.72■□□□□ 0.75
CIRBP-245ENST00000621399 CYP4A22Q5TCH4 519 aa19.72■□□□□ 0.75
CIRBP-245ENST00000621399 KLHDC7AQ5VTJ3 777 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms