RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 KPNA6O60684 536 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 RNF40O75150 1001 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 GHRP10912 638 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 PTGISQ16647 500 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 PPP1R26Q5T8A7 1209 aaPredicted RBP10.48□□□□□ -0.73
VTA1-205ENST00000620996 ARRDC4Q8NCT1 418 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 C3orf20Q8ND61 904 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 DDX27Q96GQ7 796 aaKnown RBP10.48□□□□□ -0.73
VTA1-205ENST00000620996 SLC24A3Q9HC58 644 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 CHST7Q9NS84 486 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 DONSONQ9NYP3 566 aa10.48□□□□□ -0.73
VTA1-205ENST00000620996 MGAMO43451 1857 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 PSTPIP1O43586 416 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 ECEL1O95672 775 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 MAP2K2P36507 400 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 COILP38432 576 aaPredicted RBP10.47□□□□□ -0.73
VTA1-205ENST00000620996 MLH1P40692 756 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 CAP1Q01518 475 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 IRF5Q13568 498 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 RPAINQ86UA6 219 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 ZNF560Q96MR9 790 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 ERP44Q9BS26 406 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 OSBPL8Q9BZF1 889 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 FAM114A2Q9NRY5 505 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 ATP8A1Q9Y2Q0 1164 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 E5RJQ4 531 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 KIF3CO14782 793 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 HUS1O60921 280 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 CD4P01730 458 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 CCDC130P13994 396 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 TNFRSF8P28908 595 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 PLCB3Q01970 1234 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 DHX34Q14147 1143 aaKnown RBP10.47□□□□□ -0.73
VTA1-205ENST00000620996 UBXN11Q5T124 520 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 ZNF618Q5T7W0 954 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 TXNRD3NBQ6F5E7 133 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 CCDC91Q7Z6B0 441 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 SRLQ86TD4 932 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 HSPH1Q92598 858 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 HERPUD2Q9BSE4 406 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 VIPAS39Q9H9C1 493 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 CWC15Q9P013 229 aaKnown RBP10.47□□□□□ -0.73
VTA1-205ENST00000620996 CNTN3Q9P232 1028 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 INPP5FQ9Y2H2 1132 aa10.47□□□□□ -0.73
VTA1-205ENST00000620996 R3HDM2Q9Y2K5 976 aaKnown RBP10.47□□□□□ -0.73
VTA1-205ENST00000620996 ANK1P16157 1881 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 KPNA7A9QM74 516 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 ACAT1P24752 427 aaKnown RBP10.46□□□□□ -0.73
VTA1-205ENST00000620996 FLT3P36888 993 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 GNL1P36915 607 aaPredicted RBP10.46□□□□□ -0.73
VTA1-205ENST00000620996 TAF6P49848 677 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 POU5F1Q01860 360 aaKnown RBP10.46□□□□□ -0.73
VTA1-205ENST00000620996 SOX4Q06945 474 aaPredicted RBP10.46□□□□□ -0.73
VTA1-205ENST00000620996 DHX9Q08211 1270 aaKnown RBP10.46□□□□□ -0.73
VTA1-205ENST00000620996 ZNF252P-AS1Q0IIN9 211 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 PCBP1Q15365 356 aaKnown RBP eCLIP10.46□□□□□ -0.73
VTA1-205ENST00000620996 CNGA2Q16280 664 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 TTC19Q6DKK2 380 aaPredicted RBP10.46□□□□□ -0.73
VTA1-205ENST00000620996 SCYL2Q6P3W7 929 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 SMG8Q8ND04 991 aaKnown RBP10.46□□□□□ -0.73
VTA1-205ENST00000620996 APPL2Q8NEU8 664 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 FAM71BQ8TC56 605 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 CAVIN3Q969G5 261 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 ZIM3Q96PE6 472 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 GAD1Q99259 594 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 FMO2Q99518 471 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 LHX5Q9H2C1 402 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 TRMT13Q9NUP7 481 aaKnown RBP10.46□□□□□ -0.73
VTA1-205ENST00000620996 DERAQ9Y315 318 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 CITO14578 2027 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 HMGCRP04035 888 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 CYP3A5P20815 502 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 CD52P31358 61 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 ATP11AP98196 1134 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 TAP1Q03518 808 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 KRT17Q04695 432 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 PIGHQ14442 188 aaPredicted RBP10.46□□□□□ -0.73
VTA1-205ENST00000620996 KCTD16Q68DU8 428 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 XYLT1Q86Y38 959 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 HACE1Q8IYU2 909 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 VRTNQ9H8Y1 702 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 MED4Q9NPJ6 270 aa10.46□□□□□ -0.73
VTA1-205ENST00000620996 CEP350Q5VT06 3117 aa10.46□□□□□ -0.74
VTA1-205ENST00000620996 FAM187AA6NFU0 413 aa10.46□□□□□ -0.74
VTA1-205ENST00000620996 SPTLC1O15269 473 aa10.46□□□□□ -0.74
VTA1-205ENST00000620996 RNF8O76064 485 aa10.46□□□□□ -0.74
VTA1-205ENST00000620996 KRT14P02533 472 aa10.46□□□□□ -0.74
VTA1-205ENST00000620996 LCP1P13796 627 aa10.46□□□□□ -0.74
VTA1-205ENST00000620996 LMO2P25791 158 aa10.46□□□□□ -0.74
VTA1-205ENST00000620996 SOWAHAQ2M3V2 549 aa10.46□□□□□ -0.74
VTA1-205ENST00000620996 PAN2Q504Q3 1202 aaKnown RBP10.46□□□□□ -0.74
VTA1-205ENST00000620996 MFSD7Q6UXD7 560 aa10.46□□□□□ -0.74
VTA1-205ENST00000620996 FAM183BPQ6ZVS7 135 aa10.46□□□□□ -0.74
VTA1-205ENST00000620996 OR2W6PQ8NHA6 318 aa10.46□□□□□ -0.74
VTA1-205ENST00000620996 UHMK1Q8TAS1 419 aaKnown RBP10.46□□□□□ -0.74
VTA1-205ENST00000620996 MAIP1Q8WWC4 291 aa10.46□□□□□ -0.74
VTA1-205ENST00000620996 LRRC45Q96CN5 670 aa10.46□□□□□ -0.74
VTA1-205ENST00000620996 FAM204AQ9H8W3 233 aa10.46□□□□□ -0.74
VTA1-205ENST00000620996 PLAAQ9Y263 795 aa10.46□□□□□ -0.74
VTA1-205ENST00000620996 CASTOR2A6NHX0 329 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms