RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-222ENST00000620505 PDILTQ8N807 584 aa9.41□□□□□ -0.9
TARDBP-222ENST00000620505 CACTINQ8WUQ7 758 aaKnown RBP9.41□□□□□ -0.9
TARDBP-222ENST00000620505 HPS3Q969F9 1004 aa9.41□□□□□ -0.9
TARDBP-222ENST00000620505 CHFRQ96EP1 664 aa9.41□□□□□ -0.9
TARDBP-222ENST00000620505 SLC22A12Q96S37 553 aa9.41□□□□□ -0.9
TARDBP-222ENST00000620505 CYP2S1Q96SQ9 504 aa9.41□□□□□ -0.9
TARDBP-222ENST00000620505 FAM83CQ9BQN1 747 aa9.41□□□□□ -0.9
TARDBP-222ENST00000620505 RTKNQ9BST9 563 aa9.41□□□□□ -0.9
TARDBP-222ENST00000620505 STRA6Q9BX79 667 aa9.41□□□□□ -0.9
TARDBP-222ENST00000620505 FBRSL1Q9HCM7 1045 aaKnown RBP9.41□□□□□ -0.9
TARDBP-222ENST00000620505 PANK4Q9NVE7 773 aa9.41□□□□□ -0.9
TARDBP-222ENST00000620505 SRPRBQ9Y5M8 271 aaKnown RBP9.41□□□□□ -0.9
TARDBP-222ENST00000620505 TCHHQ07283 1943 aa9.41□□□□□ -0.9
TARDBP-222ENST00000620505 OTOGLQ3ZCN5 2332 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 PTPRJQ12913 1337 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 RNF40O75150 1001 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 ATP2C2O75185 946 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 TADA3O75528 432 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 TMEM191BP0C7N4 346 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 CSH1P0DML2 217 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 CSH2P0DML3 217 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 SYT1P21579 422 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 WEE1P30291 646 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 PNPLA4P41247 253 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 STAT6P42226 847 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 GALK1P51570 392 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 PSMC1P62191 440 aaKnown RBP9.4□□□□□ -0.9
TARDBP-222ENST00000620505 MYL7Q01449 175 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 SMARCB1Q12824 385 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 GRSF1Q12849 480 aaKnown RBP eCLIP9.4□□□□□ -0.91e-11■■□□□ 12.1
TARDBP-222ENST00000620505 PSMD2Q13200 908 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 PDAP1Q13442 181 aaKnown RBP9.4□□□□□ -0.9
TARDBP-222ENST00000620505 CUL4AQ13619 759 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 SF3A2Q15428 464 aaKnown RBP9.4□□□□□ -0.9
TARDBP-222ENST00000620505 CSRP2Q16527 193 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 NFE2Q16621 373 aaPredicted RBP9.4□□□□□ -0.9
TARDBP-222ENST00000620505 KBTBD6Q86V97 674 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 MON1AQ86VX9 555 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 WDR5BQ86VZ2 330 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 NT5DC4Q86YG4 428 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 SPATA2LQ8IUW3 424 aaPredicted RBP9.4□□□□□ -0.9
TARDBP-222ENST00000620505 ADGRF2Q8IZF7 708 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 GLIS3Q8NEA6 775 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 OR5B17Q8NGF7 314 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 HHIPQ96QV1 700 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 USP28Q96RU2 1077 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 MTMR12Q9C0I1 747 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 ARRDC1-AS1Q9H2J1 176 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 SMOC1Q9H4F8 434 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 TDP1Q9NUW8 608 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 SEL1LQ9UBV2 794 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 SIX4Q9UIU6 781 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 SLC8A2Q9UPR5 921 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 WNT6Q9Y6F9 365 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 DCHS1Q96JQ0 3298 aa9.4□□□□□ -0.9
TARDBP-222ENST00000620505 GPR179Q6PRD1 2367 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 C2orf78A6NCI8 922 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 SCAMP3O14828 347 aaKnown RBP9.39□□□□□ -0.91
TARDBP-222ENST00000620505 SLC30A4O14863 429 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 RPP40O75818 363 aaKnown RBP9.39□□□□□ -0.91
TARDBP-222ENST00000620505 NOL4O94818 638 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 PAPSS2O95340 614 aaPredicted RBP9.39□□□□□ -0.91
TARDBP-222ENST00000620505 LDHAP00338 332 aaKnown RBP9.39□□□□□ -0.91
TARDBP-222ENST00000620505 CKMP06732 381 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 CENPBP07199 599 aaPredicted RBP9.39□□□□□ -0.91
TARDBP-222ENST00000620505 PDGFRBP09619 1106 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 CCDC192P0DO97 292 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 GARTP22102 1010 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 LMO2P25791 158 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 DDX6P26196 483 aaKnown RBP eCLIP9.39□□□□□ -0.915e-34■□□□□ 10
TARDBP-222ENST00000620505 CNR2P34972 360 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 IFNAR2P48551 515 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 RPL10AP62906 217 aaKnown RBP9.39□□□□□ -0.91
TARDBP-222ENST00000620505 RBP5P82980 135 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 POU5F1Q01860 360 aaKnown RBP9.39□□□□□ -0.91
TARDBP-222ENST00000620505 MTF1Q14872 753 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 AASDHQ4L235 1098 aaPredicted RBP9.39□□□□□ -0.91
TARDBP-222ENST00000620505 TMEM196Q5HYL7 178 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 PPM1JQ5JR12 505 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 CCDC73Q6ZRK6 1079 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 GPD1LQ8N335 351 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 SYNPOQ8N3V7 929 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 ARL14EPQ8N8R7 260 aaPredicted RBP9.39□□□□□ -0.91
TARDBP-222ENST00000620505 CXorf38Q8TB03 319 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 NETO1Q8TDF5 533 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 MYLPFQ96A32 169 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 PKMYT1Q99640 499 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 ACBD6Q9BR61 282 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 KIF9Q9HAQ2 790 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 RXFP3Q9NSD7 469 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 INTS13Q9NVM9 706 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 ITGA11Q9UKX5 1188 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 INVSQ9Y283 1065 aa9.39□□□□□ -0.91
TARDBP-222ENST00000620505 R3HCC1Q9Y3T6 440 aaKnown RBP9.39□□□□□ -0.91
TARDBP-222ENST00000620505 ZNF292O60281 2723 aa9.38□□□□□ -0.91
TARDBP-222ENST00000620505 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.38□□□□□ -0.91
TARDBP-222ENST00000620505 TRAV19A0A0A6YYK7 116 aa9.38□□□□□ -0.91
TARDBP-222ENST00000620505 ANTXRLA6NF34 631 aa9.38□□□□□ -0.91
TARDBP-222ENST00000620505 TRDMT1O14717 391 aaKnown RBP9.38□□□□□ -0.91
TARDBP-222ENST00000620505 KRT37O76014 449 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms