RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 FMO2Q99518 471 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 MIS12Q9H081 205 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 METTL5Q9NRN9 209 aaKnown RBP20.09■□□□□ 0.81
PSPC1-206ENST00000619300 GDAP2Q9NXN4 497 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 DDX56Q9NY93 547 aaKnown RBP20.09■□□□□ 0.81
PSPC1-206ENST00000619300 FEZ2Q9UHY8 353 aaPredicted RBP20.09■□□□□ 0.81
PSPC1-206ENST00000619300 ST3GAL5Q9UNP4 418 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 NME7Q9Y5B8 376 aa20.09■□□□□ 0.81
PSPC1-206ENST00000619300 RPS6KA5O75582 802 aa20.08■□□□□ 0.8
PSPC1-206ENST00000619300 KCNA10Q16322 511 aa20.08■□□□□ 0.8
PSPC1-206ENST00000619300 GOLGA7BQ2TAP0 167 aa20.08■□□□□ 0.8
PSPC1-206ENST00000619300 ZFYVE27Q5T4F4 411 aa20.08■□□□□ 0.8
PSPC1-206ENST00000619300 GOLGA6L1Q8N7Z2 621 aa20.08■□□□□ 0.8
PSPC1-206ENST00000619300 IPO4Q8TEX9 1081 aaKnown RBP20.08■□□□□ 0.8
PSPC1-206ENST00000619300 ATG4AQ8WYN0 398 aa20.08■□□□□ 0.8
PSPC1-206ENST00000619300 WNT8BQ93098 351 aa20.08■□□□□ 0.8
PSPC1-206ENST00000619300 SLITRK1Q96PX8 696 aa20.08■□□□□ 0.8
PSPC1-206ENST00000619300 GRHL1Q9NZI5 618 aa20.08■□□□□ 0.8
PSPC1-206ENST00000619300 R3HDM2Q9Y2K5 976 aaKnown RBP20.08■□□□□ 0.8
PSPC1-206ENST00000619300 PI4K2BG5E9Z4 385 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 AOC2O75106 756 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 CHRNA1P02708 482 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 KRT1P04264 644 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 ASGR1P07306 291 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 CCND3P30281 292 aaPredicted RBP20.07■□□□□ 0.8
PSPC1-206ENST00000619300 HSD17B3P37058 310 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 RPL21P46778 160 aaKnown RBP20.07■□□□□ 0.8
PSPC1-206ENST00000619300 PLTPP55058 493 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 COPS2P61201 443 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 SP3Q02447 781 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 SOX4Q06945 474 aaPredicted RBP20.07■□□□□ 0.8
PSPC1-206ENST00000619300 CCNG2Q16589 344 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 PKDCCQ504Y2 493 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 RPAINQ86UA6 219 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 KLHDC9Q8NEP7 349 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 KLHL11Q9NVR0 708 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 RNF186Q9NXI6 227 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 SCN1AP35498 2009 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 SCN10AQ9Y5Y9 1956 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 SPTLC1O15269 473 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 RPLP2P05387 115 aaKnown RBP20.07■□□□□ 0.8
PSPC1-206ENST00000619300 TAF6P49848 677 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 PPP1R7Q15435 360 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 ODF2Q5BJF6 829 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 TXNRD3NBQ6F5E7 133 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 ZDHHC24Q6UX98 284 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 MFSD7Q6UXD7 560 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 TMC3Q7Z5M5 1100 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 POLNQ7Z5Q5 900 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 ARFGAP1Q8N6T3 406 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 EMC1Q8N766 993 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 ATL2Q8NHH9 583 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 SENP6Q9GZR1 1112 aaPredicted RBP20.07■□□□□ 0.8
PSPC1-206ENST00000619300 CHST12Q9NRB3 414 aa20.07■□□□□ 0.8
PSPC1-206ENST00000619300 A8MXQ7 604 aa20.06■□□□□ 0.8
PSPC1-206ENST00000619300 GOLGA8KD6RF30 607 aa20.06■□□□□ 0.8
PSPC1-206ENST00000619300 PRKAR2AP13861 404 aaKnown RBP20.06■□□□□ 0.8
PSPC1-206ENST00000619300 GNL1P36915 607 aaPredicted RBP20.06■□□□□ 0.8
PSPC1-206ENST00000619300 DHX9Q08211 1270 aaKnown RBP20.06■□□□□ 0.8
PSPC1-206ENST00000619300 MTMR3Q13615 1198 aa20.06■□□□□ 0.8
PSPC1-206ENST00000619300 ACAP1Q15027 740 aa20.06■□□□□ 0.8
PSPC1-206ENST00000619300 SYDE1Q6ZW31 735 aaPredicted RBP20.06■□□□□ 0.8
PSPC1-206ENST00000619300 GRK7Q8WTQ7 553 aa20.06■□□□□ 0.8
PSPC1-206ENST00000619300 KBTBD7Q8WVZ9 684 aa20.06■□□□□ 0.8
PSPC1-206ENST00000619300 RAPGEF5Q92565 580 aa20.06■□□□□ 0.8
PSPC1-206ENST00000619300 GOLGA2P5Q9HBQ8 144 aa20.06■□□□□ 0.8
PSPC1-206ENST00000619300 E5RJQ4 531 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 PTGESO14684 152 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 LRCH4O75427 683 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 TJP3O95049 919 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 CTSHP09668 335 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 SETSIPP0DME0 302 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 ELNP15502 786 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 PTPN7P35236 360 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 UAP1Q16222 522 aaPredicted RBP20.05■□□□□ 0.8
PSPC1-206ENST00000619300 HADHQ16836 314 aaKnown RBP20.05■□□□□ 0.8
PSPC1-206ENST00000619300 SV2CQ496J9 727 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 FAM102AQ5T9C2 384 aaPredicted RBP20.05■□□□□ 0.8
PSPC1-206ENST00000619300 ARHGAP17Q68EM7 881 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 CCSAPQ6IQ19 270 aaPredicted RBP20.05■□□□□ 0.8
PSPC1-206ENST00000619300 SPOCD1Q6ZMY3 1216 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 LIMS2Q7Z4I7 341 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 TTC30AQ86WT1 665 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 CRYBG2Q8N1P7 616 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 FBXO25Q8TCJ0 367 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 FAM49BQ9NUQ9 324 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 HESX1Q9UBX0 185 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 PLAAQ9Y263 795 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 PPFIA2O75334 1257 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 MYCNP04198 464 aaPredicted RBP20.05■□□□□ 0.8
PSPC1-206ENST00000619300 KRT7P08729 469 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 KRT10P13645 584 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 LRPAP1P30533 357 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 SLC25A11Q02978 314 aaKnown RBP20.05■□□□□ 0.8
PSPC1-206ENST00000619300 KRT17Q04695 432 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 MGAT3Q09327 533 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 OR6B2Q6IFH4 312 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 PMF1Q6P1K2 205 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 LRIG3Q6UXM1 1119 aa20.05■□□□□ 0.8
PSPC1-206ENST00000619300 APPL2Q8NEU8 664 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms