RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 SLC10A3P09131 477 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 SRGAP2CP0DJJ0 459 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 ATP4AP20648 1035 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 SKIV2L2P42285 1042 aaKnown RBP7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 NSFP46459 744 aaKnown RBP7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 CTCFP49711 727 aaPredicted RBP7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 CDR2Q01850 454 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 KLC1Q07866 573 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 DNAJC3Q13217 504 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 ACVR2BQ13705 512 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 KIF22Q14807 665 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 TLDC1Q6P9B6 456 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 LRRC71Q8N4P6 559 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 XXYLT1Q8NBI6 393 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 SLC17A8Q8NDX2 589 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 SLC30A5Q8TAD4 765 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 NPLOC4Q8TAT6 608 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 TRIM11Q96F44 468 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 BTBD6Q96KE9 485 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 ZIC5Q96T25 663 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 HEMGNQ9BXL5 484 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 SAYSD1Q9NPB0 183 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 CTNNAL1Q9UBT7 734 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 GTF3C4Q9UKN8 822 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 CORO1CQ9ULV4 474 aaPredicted RBP7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 A8MUI8 341 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 K7ERI5 159 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 NDC80O14777 642 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 HARSP12081 509 aaKnown RBP7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 PTGIRP43119 386 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 CCNHP51946 323 aaPredicted RBP7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 CRHR2Q13324 411 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 GRB14Q14449 540 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 MTFR1Q15390 333 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 RNF43Q68DV7 783 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 TTC27Q6P3X3 843 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 RIBC1Q8N443 379 aaPredicted RBP7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 PAF1Q8N7H5 531 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 TRAPPC12Q8WVT3 735 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 DNAJC9Q8WXX5 260 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 POMGNT1Q8WZA1 660 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 GBP5Q96PP8 586 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 PCYT2Q99447 389 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 TXLNGYQ9BZA5 131 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 TRIM4Q9C037 500 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 HAO1Q9UJM8 370 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 COG5Q9UP83 839 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 TRIM33Q9UPN9 1127 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 SMG5Q9UPR3 1016 aaKnown RBP7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 TLL2Q9Y6L7 1015 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 PTPRFP10586 1907 aa7.35□□□□□ -1.23
SRGAP3-213ENST00000618999 LIN7AO14910 233 aaPredicted RBP7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 SNAI1O95863 264 aaPredicted RBP7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 IFNB1P01574 187 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 GZMAP12544 262 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 LIG4P49917 911 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 WDR44Q5JSH3 913 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 FITM2Q8N6M3 262 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 OR6J1Q8NGC5 347 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 ATG4AQ8WYN0 398 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 BSNDQ8WZ55 320 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 ZBTB10Q96DT7 871 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 FAM81BQ96LP2 452 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 TTC25Q96NG3 672 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 FIZ1Q96SL8 496 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 CBWD1Q9BRT8 395 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 TUBB6Q9BUF5 446 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 TRABDQ9H4I3 376 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 RNPEPL1Q9HAU8 725 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 LRRC4CQ9HCJ2 640 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 XPNPEP1Q9NQW7 623 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 ERAP1Q9NZ08 941 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 SENP1Q9P0U3 644 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 TBX20Q9UMR3 447 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 PHTF1Q9UMS5 762 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 USP20Q9Y2K6 914 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 P4HA2O15460 535 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 CIB2O75838 187 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 ATF7P17544 494 aaPredicted RBP7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 CALB2P22676 271 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 PHBP35232 272 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 TNFAIP2Q03169 654 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 C6orf132Q5T0Z8 1188 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 FAXDC2Q96IV6 333 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 RBM15Q96T37 977 aaKnown RBP eCLIP7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 ADAM7Q9H2U9 754 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 C17orf75Q9HAS0 396 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 ARHGEF3Q9NR81 526 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 ADAM22Q9P0K1 906 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 NAALADL1Q9UQQ1 740 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 PCDHA3Q9Y5H8 950 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 TTLL13PA6NNM8 815 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 E7ENQ6 273 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 H0YCG3 227 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 HNRNPCL1O60812 293 aaKnown RBP7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 WFS1O76024 890 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 STBD1O95210 358 aa7.34□□□□□ -1.23
SRGAP3-213ENST00000618999 GJB6O95452 261 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms