RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 CORO1BQ9BR76 489 aa16.62■□□□□ 0.25
RPP40-207ENST00000618533 DNAJC25Q9H1X3 360 aa16.62■□□□□ 0.25
RPP40-207ENST00000618533 HCFC1R1Q9NWW0 138 aa16.62■□□□□ 0.25
RPP40-207ENST00000618533 EHD2Q9NZN4 543 aa16.62■□□□□ 0.25
RPP40-207ENST00000618533 MRPS23Q9Y3D9 190 aaKnown RBP16.62■□□□□ 0.25
RPP40-207ENST00000618533 A0A0C4DFX4 3053 aa16.62■□□□□ 0.25
RPP40-207ENST00000618533 GREB1Q4ZG55 1949 aa16.62■□□□□ 0.25
RPP40-207ENST00000618533 MYH10P35580 1976 aa16.62■□□□□ 0.25
RPP40-207ENST00000618533 DENND4CQ5VZ89 1909 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 CSH1P0DML2 217 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 CSH2P0DML3 217 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 CYP2F1P24903 491 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 GBP2P32456 591 aaPredicted RBP16.61■□□□□ 0.25
RPP40-207ENST00000618533 MYL5Q02045 173 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 CYP27A1Q02318 531 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 GCNT1Q02742 428 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 TAF12Q16514 161 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 PRSS36Q5K4E3 855 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 GET4Q7L5D6 327 aaPredicted RBP16.61■□□□□ 0.25
RPP40-207ENST00000618533 DNAJB7Q7Z6W7 309 aaPredicted RBP16.61■□□□□ 0.25
RPP40-207ENST00000618533 EHBP1Q8NDI1 1231 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 LMO3Q8TAP4 145 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 JAKMIP2Q96AA8 810 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 SPATA17Q96L03 361 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 BPIFA3Q9BQP9 254 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 GPR88Q9GZN0 384 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 DPEP3Q9H4B8 488 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 GDE1Q9NZC3 331 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 UXTQ9UBK9 157 aaPredicted RBP16.61■□□□□ 0.25
RPP40-207ENST00000618533 ZMYM5Q9UJ78 669 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 CDH7Q9ULB5 785 aa16.61■□□□□ 0.25
RPP40-207ENST00000618533 KCNJ18B7U540 433 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 LRRN2O75325 713 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 LAMP2P13473 410 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 ANXA13P27216 316 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 NTHL1P78549 312 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 KCNJ12Q14500 433 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 TCP11X2Q5H9J9 407 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 CDKAL1Q5VV42 579 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 GBP6Q6ZN66 633 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 C11orf57Q6ZUT1 292 aaPredicted RBP16.6■□□□□ 0.25
RPP40-207ENST00000618533 ACOT1Q86TX2 421 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 ANKRD20A12PQ8NF67 263 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 TATDN2Q93075 761 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 ELMO3Q96BJ8 720 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 TRMT2BQ96GJ1 504 aaKnown RBP16.6■□□□□ 0.25
RPP40-207ENST00000618533 SMARCD1Q96GM5 515 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 C8orf48Q96LL4 319 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 TUBGCP2Q9BSJ2 902 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 LRRC3Q9BY71 257 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.6■□□□□ 0.25
RPP40-207ENST00000618533 CISHQ9NSE2 258 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 GCNT4Q9P109 453 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 IGSF9Q9P2J2 1179 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 MYO10Q9HD67 2058 aa16.6■□□□□ 0.25
RPP40-207ENST00000618533 SOBPA7XYQ1 873 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 SOAT2O75908 522 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 NOL4O94818 638 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 TPM2P07951 284 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 CD58P19256 250 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 BDNFP23560 247 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 CDC25CP30307 473 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 GRIK1P39086 918 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 VWA3BQ502W6 1294 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 ENOSF1Q7L5Y1 443 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 TMC8Q8IU68 726 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 RNF135Q8IUD6 432 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 FGF13Q92913 245 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 MYRFLQ96LU7 910 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 GCNAQ96QF7 691 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 MYADMQ96S97 322 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 LPIN3Q9BQK8 851 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 B3GNT5Q9BYG0 378 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 NDST4Q9H3R1 872 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 CD320Q9NPF0 282 aa16.59■□□□□ 0.25
RPP40-207ENST00000618533 SAMSN1Q9NSI8 373 aaKnown RBP16.59■□□□□ 0.25
RPP40-207ENST00000618533 ZNF638Q14966 1978 aaKnown RBP16.58■□□□□ 0.25
RPP40-207ENST00000618533 DLL1O00548 723 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 CAVIN2O95810 425 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 MYL4P12829 197 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 ALADP13716 330 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 SP100P23497 879 aaPredicted RBP16.58■□□□□ 0.24
RPP40-207ENST00000618533 EXOC3L4Q17RC7 722 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 CCDC142Q17RM4 750 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 SLC5A9Q2M3M2 681 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 MTSS1LQ765P7 747 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 FAM35AQ86V20 835 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 SCN4BQ8IWT1 228 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 NPAS3Q8IXF0 933 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 HS6ST3Q8IZP7 471 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 FUKQ8N0W3 1084 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 PPM1KQ8N3J5 372 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 ITFG1Q8TB96 612 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 WHAMMQ8TF30 809 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 TMEM176AQ96HP8 235 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 HNRNPABQ99729 332 aaKnown RBP16.58■□□□□ 0.24
RPP40-207ENST00000618533 ARID3AQ99856 593 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 MED10Q9BTT4 135 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 ZNF518BQ9C0D4 1074 aa16.58■□□□□ 0.24
RPP40-207ENST00000618533 INTS2Q9H0H0 1204 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms