RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 NLRP12P59046 1061 aa23.61■■□□□ 1.37
SYNGR3-206ENST00000618464 WDR72Q3MJ13 1102 aa23.61■■□□□ 1.37
SYNGR3-206ENST00000618464 ZNF852Q6ZMS4 543 aa23.61■■□□□ 1.37
SYNGR3-206ENST00000618464 TMEM150AQ86TG1 271 aa23.61■■□□□ 1.37
SYNGR3-206ENST00000618464 MYLPFQ96A32 169 aa23.61■■□□□ 1.37
SYNGR3-206ENST00000618464 LRRC3BQ96PB8 259 aa23.61■■□□□ 1.37
SYNGR3-206ENST00000618464 SNX25Q9H3E2 840 aa23.61■■□□□ 1.37
SYNGR3-206ENST00000618464 SEMA4AQ9H3S1 761 aa23.61■■□□□ 1.37
SYNGR3-206ENST00000618464 CRTAC1Q9NQ79 661 aa23.61■■□□□ 1.37
SYNGR3-206ENST00000618464 NXF1Q9UBU9 619 aaKnown RBP23.61■■□□□ 1.37
SYNGR3-206ENST00000618464 NDRG2Q9UN36 371 aaKnown RBP23.61■■□□□ 1.37
SYNGR3-206ENST00000618464 MAPK8IP1Q9UQF2 711 aa23.61■■□□□ 1.37
SYNGR3-206ENST00000618464 COL4A2P08572 1712 aa23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 SLC38A8A6NNN8 435 aa23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 PDXKO00764 312 aa23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 RHOBTB3O94955 611 aa23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 CSH1P0DML2 217 aa23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 CSH2P0DML3 217 aa23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 TDRD10Q5VZ19 366 aaKnown RBP23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 CEP135Q66GS9 1140 aa23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 FAM171BQ6P995 826 aa23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 SLC9A9Q8IVB4 645 aa23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 OR6B3Q8NGW1 331 aa23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 PARD3BQ8TEW8 1205 aa23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 ELMO3Q96BJ8 720 aa23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 SLC46A2Q9BY10 475 aa23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 BCO2Q9BYV7 579 aa23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 NME7Q9Y5B8 376 aa23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 NUP210Q8TEM1 1887 aaPredicted RBP23.6■■□□□ 1.37
SYNGR3-206ENST00000618464 SHISA7A6NL88 538 aa23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 F11P03951 625 aa23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 GNL1P36915 607 aaPredicted RBP23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 DLG4P78352 724 aa23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 CYP27A1Q02318 531 aa23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 CFAP221Q4G0U5 840 aa23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 C4orf50Q6ZRC1 276 aa23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 MAB21L3Q8N8X9 362 aa23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 SYAP1Q96A49 352 aaPredicted RBP23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 FUBP3Q96I24 572 aaKnown RBP eCLIP23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 ZFYVE19Q96K21 471 aa23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 OSBPL6Q9BZF3 934 aa23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 XYLT2Q9H1B5 865 aa23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 SPATA6Q9NWH7 488 aaPredicted RBP23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 MAGEC2Q9UBF1 373 aaPredicted RBP23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 PIAS3Q9Y6X2 628 aa23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 CACNA1IQ9P0X4 2223 aa23.59■■□□□ 1.37
SYNGR3-206ENST00000618464 CALUO43852 315 aaPredicted RBP23.58■■□□□ 1.37
SYNGR3-206ENST00000618464 BDNFP23560 247 aa23.58■■□□□ 1.37
SYNGR3-206ENST00000618464 FCHO2Q0JRZ9 810 aa23.58■■□□□ 1.37
SYNGR3-206ENST00000618464 MDH1BQ5I0G3 518 aa23.58■■□□□ 1.37
SYNGR3-206ENST00000618464 CMTM8Q8IZV2 173 aa23.58■■□□□ 1.37
SYNGR3-206ENST00000618464 TTC8Q8TAM2 541 aa23.58■■□□□ 1.37
SYNGR3-206ENST00000618464 CSGALNACT1Q8TDX6 532 aa23.58■■□□□ 1.37
SYNGR3-206ENST00000618464 NELL2Q99435 816 aa23.58■■□□□ 1.37
SYNGR3-206ENST00000618464 TRPV5Q9NQA5 729 aa23.58■■□□□ 1.37
SYNGR3-206ENST00000618464 MRPS17Q9Y2R5 130 aaKnown RBP23.58■■□□□ 1.37
SYNGR3-206ENST00000618464 SPTBN4Q9H254 2564 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 ARNTLO00327 626 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 CHADO15335 359 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 TACC1O75410 805 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 NOL4O94818 638 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 KIF20AO95235 890 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 ATICP31939 592 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 NUCB2P80303 420 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 NCOA4Q13772 614 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 MAPRE1Q15691 268 aaKnown RBP23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 ZNF699Q32M78 642 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 TXNDC8Q6A555 127 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 SCARA5Q6ZMJ2 495 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 MRPS31Q92665 395 aaKnown RBP23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 PCED1BQ96HM7 432 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 DPEP3Q9H4B8 488 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 SMYD3Q9H7B4 428 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 UXTQ9UBK9 157 aaPredicted RBP23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 FRMD4BQ9Y2L6 1034 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 DCHS1Q96JQ0 3298 aa23.57■■□□□ 1.36
SYNGR3-206ENST00000618464 MAN2B1O00754 1011 aa23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 TADA3O75528 432 aa23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 STAU1O95793 577 aaKnown RBP23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 C4BPAP04003 597 aaKnown RBP23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 GRIK1P39086 918 aa23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 MAGEA11P43364 429 aa23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 RAP1GAPP47736 663 aa23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 SOX9P48436 509 aa23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 KPNA1P52294 538 aaPredicted RBP23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 AP3M2P53677 418 aa23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 CLDN10P78369 228 aa23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 ZC3H14Q6PJT7 736 aaKnown RBP23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 MYCBPAPQ8TBZ2 947 aa23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 BPIFB1Q8TDL5 484 aa23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 FAM3CQ92520 227 aa23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 TRPC7Q9HCX4 862 aa23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 OBP2AQ9NY56 170 aa23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 TRAF3IP3Q9Y228 551 aa23.56■■□□□ 1.36
SYNGR3-206ENST00000618464 GVINP1Q7Z2Y8 2422 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 FANCMQ8IYD8 2048 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 PATJQ8NI35 1801 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 GOLGA6L4A6NEF3 574 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 NCAM2O15394 837 aa23.55■■□□□ 1.36
SYNGR3-206ENST00000618464 LAMTOR5O43504 91 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms