RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 CDK16Q00536 496 aa8.34□□□□□ -1.08
CHD7-212ENST00000618450 AP1B1Q10567 949 aa8.34□□□□□ -1.08
CHD7-212ENST00000618450 CIAPIN1Q6FI81 312 aa8.34□□□□□ -1.08
CHD7-212ENST00000618450 TRNP1Q6NT89 227 aa8.34□□□□□ -1.08
CHD7-212ENST00000618450 APBB1IPQ7Z5R6 666 aaPredicted RBP8.34□□□□□ -1.08
CHD7-212ENST00000618450 LRRC6Q86X45 466 aa8.34□□□□□ -1.08
CHD7-212ENST00000618450 CMASQ8NFW8 434 aaPredicted RBP8.34□□□□□ -1.08
CHD7-212ENST00000618450 FBF1Q8TES7 1133 aa8.34□□□□□ -1.08
CHD7-212ENST00000618450 SLC44A1Q8WWI5 657 aa8.34□□□□□ -1.08
CHD7-212ENST00000618450 TFAP2BQ92481 460 aa8.34□□□□□ -1.08
CHD7-212ENST00000618450 PDCD2LQ9BRP1 358 aa8.34□□□□□ -1.08
CHD7-212ENST00000618450 FAM167BQ9BTA0 163 aa8.34□□□□□ -1.08
CHD7-212ENST00000618450 XYLT2Q9H1B5 865 aa8.34□□□□□ -1.08
CHD7-212ENST00000618450 ZDHHC7Q9NXF8 308 aa8.34□□□□□ -1.08
CHD7-212ENST00000618450 NKIRAS1Q9NYS0 192 aa8.34□□□□□ -1.08
CHD7-212ENST00000618450 PDCD11Q14690 1871 aaKnown RBP8.33□□□□□ -1.08
CHD7-212ENST00000618450 MAGEC1O60732 1142 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 RFPL1O75677 317 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 KRT36O76013 467 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 IL4RP24394 825 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 CRABP2P29373 138 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 RPL22P35268 128 aaKnown RBP8.33□□□□□ -1.08
CHD7-212ENST00000618450 CTCFP49711 727 aaPredicted RBP8.33□□□□□ -1.08
CHD7-212ENST00000618450 VPS41P49754 854 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 GRM2Q14416 872 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 KPNB1Q14974 876 aaKnown RBP8.33□□□□□ -1.08
CHD7-212ENST00000618450 FKBP1CQ5VVH2 108 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 CYP4F22Q6NT55 531 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 ZNF534Q76KX8 674 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 VSIG10LQ86VR7 867 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 CHURC1Q8WUH1 139 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 DYDC1Q8WWB3 177 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 TEPSINQ96N21 525 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 PAFAH2Q99487 392 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 USP29Q9HBJ7 922 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 PARVAQ9NVD7 372 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 SAE1Q9UBE0 346 aaPredicted RBP8.33□□□□□ -1.08
CHD7-212ENST00000618450 PI4K2BG5E9Z4 385 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 ZNF195O14628 629 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 LRCH4O75427 683 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 ARL2P36404 184 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 LACTBP83111 547 aaPredicted RBP8.33□□□□□ -1.08
CHD7-212ENST00000618450 DGKZQ13574 1117 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 TBC1D10BQ4KMP7 808 aaPredicted RBP8.33□□□□□ -1.08
CHD7-212ENST00000618450 BBS12Q6ZW61 710 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 SPDYE1Q8NFV5 336 aaPredicted RBP8.33□□□□□ -1.08
CHD7-212ENST00000618450 NPHS2Q9NP85 383 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 SMYD2Q9NRG4 433 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 KLHL11Q9NVR0 708 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.33□□□□□ -1.08
CHD7-212ENST00000618450 TJP2Q9UDY2 1190 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 GTF2IRD1Q9UHL9 959 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 TTLL3Q9Y4R7 772 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 C2orf71A6NGG8 1288 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 F8W8V4 182 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 TLR3O15455 904 aaKnown RBP8.33□□□□□ -1.08
CHD7-212ENST00000618450 PSMG1O95456 288 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 ASS1P00966 412 aaKnown RBP8.33□□□□□ -1.08
CHD7-212ENST00000618450 CD48P09326 243 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 AMPD1P23109 780 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 NRLP54845 237 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 SP2Q02086 613 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 GPS1Q13098 491 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 SLC5A9Q2M3M2 681 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 RABGAP1LQ5R372 815 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 RNF220Q5VTB9 566 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 PRPF39Q86UA1 669 aaKnown RBP8.33□□□□□ -1.08
CHD7-212ENST00000618450 UNC45BQ8IWX7 931 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 ZBED8Q8IZ13 594 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 C8orf37Q96NL8 207 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 PANX3Q96QZ0 392 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 C11orf70Q9BRQ4 267 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 C1orf21Q9H246 121 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 DHX33Q9H6R0 707 aaKnown RBP8.33□□□□□ -1.08
CHD7-212ENST00000618450 IP6K2Q9UHH9 426 aa8.33□□□□□ -1.08
CHD7-212ENST00000618450 PRKCHP24723 683 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 SFNP31947 248 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 RPS6P62753 249 aaKnown RBP8.32□□□□□ -1.08
CHD7-212ENST00000618450 TARBP2Q15633 366 aaKnown RBP8.32□□□□□ -1.08
CHD7-212ENST00000618450 HP1BP3Q5SSJ5 553 aaPredicted RBP8.32□□□□□ -1.08
CHD7-212ENST00000618450 SNX30Q5VWJ9 437 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 FNIP1Q8TF40 1166 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 SCG3Q8WXD2 468 aaKnown RBP8.32□□□□□ -1.08
CHD7-212ENST00000618450 DNAJC9Q8WXX5 260 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 FAM213AQ9BRX8 229 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.32□□□□□ -1.08
CHD7-212ENST00000618450 DNAJB4Q9UDY4 337 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 LRCH1Q9Y2L9 728 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 RIPK3Q9Y572 518 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 SERPINB3P29508 390 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 ARRB2P32121 409 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 ASPAP45381 313 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 GABRB2P47870 512 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 JAK3P52333 1124 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 SLC34A1Q06495 639 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 PDIA2Q13087 525 aaKnown RBP8.32□□□□□ -1.08
CHD7-212ENST00000618450 GRM1Q13255 1194 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 PGM2L1Q6PCE3 622 aa8.32□□□□□ -1.08
CHD7-212ENST00000618450 CCDC60Q8IWA6 550 aaPredicted RBP8.32□□□□□ -1.08
CHD7-212ENST00000618450 ZBTB45Q96K62 511 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms