RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 GYS2P54840 703 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 HASPINQ8TF76 798 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 NIFKQ9BYG3 293 aaKnown RBP14.54□□□□□ -0.08
CIITA-213ENST00000618327 CFAP69A5D8W1 941 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 KRT38O76015 456 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 COILP38432 576 aaPredicted RBP14.54□□□□□ -0.08
CIITA-213ENST00000618327 C11orf63Q6NUN7 778 aa14.54□□□□□ -0.08
CIITA-213ENST00000618327 ZNF512Q96ME7 567 aaPredicted RBP14.54□□□□□ -0.08
CIITA-213ENST00000618327 IRS2Q9Y4H2 1338 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 B4GALT5O43286 388 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 CABYRO75952 493 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 TNFSF9P41273 254 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 EPS8L1Q8TE68 723 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 SH3TC2Q8TF17 1288 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 BSNDQ8WZ55 320 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 TSPAN16Q9UKR8 245 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 DSEQ9UL01 958 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 FAF1Q9UNN5 650 aaPredicted RBP14.53□□□□□ -0.08
CIITA-213ENST00000618327 SLC8A2Q9UPR5 921 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 MYH13Q9UKX3 1938 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 MX2P20592 715 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 MAGOHP61326 146 aaKnown RBP14.53□□□□□ -0.08
CIITA-213ENST00000618327 DDX42Q86XP3 938 aaKnown RBP eCLIP14.53□□□□□ -0.08
CIITA-213ENST00000618327 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.53□□□□□ -0.08
CIITA-213ENST00000618327 VCPIP1Q96JH7 1222 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 Q9H521 79 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 ADAM21Q9UKJ8 722 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 PRRG1O14668 218 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 MSCO60682 206 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 PAMP19021 973 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 NR1H3Q13133 447 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 SNX17Q15036 470 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 PCBP1Q15365 356 aaKnown RBP eCLIP14.53□□□□□ -0.08
CIITA-213ENST00000618327 ZACNQ401N2 412 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 TDRD10Q5VZ19 366 aaKnown RBP14.53□□□□□ -0.08
CIITA-213ENST00000618327 SRRM1Q8IYB3 904 aaKnown RBP14.53□□□□□ -0.08
CIITA-213ENST00000618327 GDAP1Q8TB36 358 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 ACTRT1Q8TDG2 376 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 DHX33Q9H6R0 707 aaKnown RBP14.53□□□□□ -0.08
CIITA-213ENST00000618327 RAB6BQ9NRW1 208 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 MARF1Q9Y4F3 1742 aaKnown RBP14.53□□□□□ -0.08
CIITA-213ENST00000618327 PAEPP09466 180 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 FNTAP49354 379 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 BST2Q10589 180 aaKnown RBP14.53□□□□□ -0.08
CIITA-213ENST00000618327 TMCO4Q5TGY1 634 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 EEF1DP3Q658K8 133 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 EMC1Q8N766 993 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 PPM1NQ8N819 430 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 TMEM169Q96HH4 297 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 MAML3Q96JK9 1138 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 TTC1Q99614 292 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 RNPEPQ9H4A4 650 aa14.53□□□□□ -0.08
CIITA-213ENST00000618327 M0QYT0 321 aa14.52□□□□□ -0.08
CIITA-213ENST00000618327 MMP3P08254 477 aa14.52□□□□□ -0.08
CIITA-213ENST00000618327 HMBSP08397 361 aa14.52□□□□□ -0.08
CIITA-213ENST00000618327 PRKAR2AP13861 404 aaKnown RBP14.52□□□□□ -0.08
CIITA-213ENST00000618327 NFIL3Q16649 462 aa14.52□□□□□ -0.08
CIITA-213ENST00000618327 KCNT1Q5JUK3 1230 aa14.52□□□□□ -0.08
CIITA-213ENST00000618327 ANKRD7Q92527 254 aa14.52□□□□□ -0.08
CIITA-213ENST00000618327 MFSD14AQ96MC6 490 aa14.52□□□□□ -0.08
CIITA-213ENST00000618327 RBM15Q96T37 977 aaKnown RBP eCLIP14.52□□□□□ -0.08
CIITA-213ENST00000618327 CNPY3Q9BT09 278 aa14.52□□□□□ -0.08
CIITA-213ENST00000618327 ISCUQ9H1K1 167 aa14.52□□□□□ -0.08
CIITA-213ENST00000618327 DDIT4Q9NX09 232 aa14.52□□□□□ -0.08
CIITA-213ENST00000618327 TOGARAM1Q9Y4F4 1720 aa14.52□□□□□ -0.08
CIITA-213ENST00000618327 KPNA7A9QM74 516 aa14.52□□□□□ -0.09
CIITA-213ENST00000618327 PFDN1O60925 122 aa14.52□□□□□ -0.09
CIITA-213ENST00000618327 APRTP07741 180 aa14.52□□□□□ -0.09
CIITA-213ENST00000618327 NFICP08651 508 aa14.52□□□□□ -0.09
CIITA-213ENST00000618327 PMLP29590 882 aa14.52□□□□□ -0.09
CIITA-213ENST00000618327 IFT43Q96FT9 208 aa14.52□□□□□ -0.09
CIITA-213ENST00000618327 SLITRK1Q96PX8 696 aa14.52□□□□□ -0.09
CIITA-213ENST00000618327 NUDCD1Q96RS6 583 aa14.52□□□□□ -0.09
CIITA-213ENST00000618327 TSPYL2Q9H2G4 693 aaPredicted RBP14.52□□□□□ -0.09
CIITA-213ENST00000618327 ST6GALNAC4Q9H4F1 302 aa14.52□□□□□ -0.09
CIITA-213ENST00000618327 KRT82Q9NSB4 513 aa14.52□□□□□ -0.09
CIITA-213ENST00000618327 DDX43Q9NXZ2 648 aaKnown RBP14.52□□□□□ -0.09
CIITA-213ENST00000618327 TIMM13Q9Y5L4 95 aaPredicted RBP14.52□□□□□ -0.09
CIITA-213ENST00000618327 CDY2AQ9Y6F7 541 aa14.52□□□□□ -0.09
CIITA-213ENST00000618327 CCDC88AQ3V6T2 1871 aa14.52□□□□□ -0.09
CIITA-213ENST00000618327 PQBP1O60828 265 aaKnown RBP14.52□□□□□ -0.09
CIITA-213ENST00000618327 SPIRE1Q08AE8 756 aa14.52□□□□□ -0.09
CIITA-213ENST00000618327 MDH1BQ5I0G3 518 aa14.52□□□□□ -0.09
CIITA-213ENST00000618327 OR5B17Q8NGF7 314 aa14.52□□□□□ -0.09
CIITA-213ENST00000618327 HES2Q9Y543 173 aa14.52□□□□□ -0.09
CIITA-213ENST00000618327 GSTA1P08263 222 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 GSTA2P09210 222 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 HNRNPH3P31942 346 aaKnown RBP14.51□□□□□ -0.09
CIITA-213ENST00000618327 HNRNPH2P55795 449 aaKnown RBP14.51□□□□□ -0.09
CIITA-213ENST00000618327 ZCWPW2Q504Y3 356 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 HSP90AA5PQ58FG0 334 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 FAM71AQ8IYT1 594 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 BRI3BPQ8WY22 251 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 SHC3Q92529 594 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 L3MBTL3Q96JM7 780 aaPredicted RBP14.51□□□□□ -0.09
CIITA-213ENST00000618327 VIPAS39Q9H9C1 493 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 ACP6Q9NPH0 428 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 ARHGAP28Q9P2N2 729 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 COL1A2P08123 1366 aa14.51□□□□□ -0.09
CIITA-213ENST00000618327 RPTORQ8N122 1335 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms