RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 LRFN2Q9ULH4 789 aa17.77■□□□□ 0.44
TRAPPC3-210ENST00000617904 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.77■□□□□ 0.44
TRAPPC3-210ENST00000617904 REV3LO60673 3130 aa17.77■□□□□ 0.43
TRAPPC3-210ENST00000617904 MYO1FO00160 1098 aa17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 EFCAB14O75071 495 aa17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 TUBBP07437 444 aa17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 CDH5P33151 784 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 GNL1P36915 607 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 LHX1P48742 406 aa17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 CDH8P55286 799 aa17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 IKBKEQ14164 716 aa17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 AAK1Q2M2I8 961 aa17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 AGMOQ6ZNB7 445 aa17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 SLFN11Q7Z7L1 901 aa17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 PASD1Q8IV76 773 aa17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 SLC4A11Q8NBS3 891 aa17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 FAM193BQ96PV7 902 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 OSBPL9Q96SU4 736 aa17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 RAD9AQ99638 391 aa17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 ELAC1Q9H777 363 aaKnown RBP17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 ACP6Q9NPH0 428 aa17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 SALL4Q9UJQ4 1053 aa17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 COL4A4P53420 1690 aaPredicted RBP17.76■□□□□ 0.43
TRAPPC3-210ENST00000617904 PODXLO00592 558 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 PTGESO14684 152 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 SPOPO43791 374 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 FTCDO95954 541 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 WARSP23381 471 aaKnown RBP17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 CETN2P41208 172 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 LILRA4P59901 499 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 AMPD2Q01433 879 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 TUSC3Q13454 348 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 MON1BQ7L1V2 547 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 PALB2Q86YC2 1186 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 ADGRF2Q8IZF7 708 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 C11orf70Q9BRQ4 267 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 TMEM161AQ9NX61 479 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 COG5Q9UP83 839 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 PCDHB7Q9Y5E2 793 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 TRANK1O15050 2925 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 NCOR1O75376 2440 aa17.75■□□□□ 0.43
TRAPPC3-210ENST00000617904 CCDC66A2RUB6 948 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 LINC01553A4QN01 128 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 M0QYV0 167 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 CYB561D2O14569 222 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 CTIFO43310 598 aaKnown RBP17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 BUB1BO60566 1050 aaPredicted RBP17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 ODC1P11926 461 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 MMP8P22894 467 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 SCNN1GP51170 649 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 ERVK-21P61565 698 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 RNASELQ05823 741 aaKnown RBP17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 DNAJC24Q6P3W2 148 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 DCUN1D2Q6PH85 259 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 LCLAT1Q6UWP7 414 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 LRRC57Q8N9N7 239 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 DBF4BQ8NFT6 615 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 OLIG1Q8TAK6 271 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 GDPD5Q8WTR4 605 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 ARHGEF26Q96DR7 871 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 ZFP42Q96MM3 310 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 ELOVL4Q9GZR5 314 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 SDCBP2Q9H190 292 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 IP6K2Q9UHH9 426 aa17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.74■□□□□ 0.43
TRAPPC3-210ENST00000617904 C9IYK1 514 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 KCNK3O14649 394 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 INPPL1O15357 1258 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 TRAPPC3O43617 180 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 COL9A1P20849 921 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 IBSPP21815 317 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 MCM3P25205 808 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 PCSK1P29120 753 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 FAM189BP81408 668 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 MESDQ14696 234 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 FAM117BQ6P1L5 589 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 DCLRE1AQ6PJP8 1040 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 MMS22LQ6ZRQ5 1243 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 C1orf131Q8NDD1 294 aaKnown RBP17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 LPPQ93052 612 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 C18orf8Q96DM3 657 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 TGS1Q96RS0 853 aaKnown RBP17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 TLR10Q9BXR5 811 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 OSGEPQ9NPF4 335 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 ARGLU1Q9NWB6 273 aaPredicted RBP17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 LMCD1Q9NZU5 365 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 ANAPC7Q9UJX3 599 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 INPP5FQ9Y2H2 1132 aa17.73■□□□□ 0.43
TRAPPC3-210ENST00000617904 TMEM110-MUSTN1A8MSY1 372 aa17.72■□□□□ 0.43
TRAPPC3-210ENST00000617904 MICAL2O94851 1124 aa17.72■□□□□ 0.43
TRAPPC3-210ENST00000617904 ITIH3Q06033 890 aa17.72■□□□□ 0.43
TRAPPC3-210ENST00000617904 ZNF268Q14587 947 aaPredicted RBP17.72■□□□□ 0.43
TRAPPC3-210ENST00000617904 PPP2R5EQ16537 467 aa17.72■□□□□ 0.43
TRAPPC3-210ENST00000617904 SOWAHAQ2M3V2 549 aa17.72■□□□□ 0.43
TRAPPC3-210ENST00000617904 PLEKHG4Q58EX7 1191 aa17.72■□□□□ 0.43
TRAPPC3-210ENST00000617904 ODF2Q5BJF6 829 aa17.72■□□□□ 0.43
TRAPPC3-210ENST00000617904 NOMO2Q5JPE7 1267 aa17.72■□□□□ 0.43
TRAPPC3-210ENST00000617904 ARHGAP17Q68EM7 881 aa17.72■□□□□ 0.43
TRAPPC3-210ENST00000617904 NT5DC3Q86UY8 548 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms