RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 PIAS3Q9Y6X2 628 aa26.97■■□□□ 1.91
VEGFA-228ENST00000617771 CALUO43852 315 aaPredicted RBP26.96■■□□□ 1.91
VEGFA-228ENST00000617771 TACC1O75410 805 aa26.96■■□□□ 1.91
VEGFA-228ENST00000617771 RHOBTB3O94955 611 aa26.96■■□□□ 1.91
VEGFA-228ENST00000617771 F11P03951 625 aa26.96■■□□□ 1.91
VEGFA-228ENST00000617771 NR3C1P04150 777 aa26.96■■□□□ 1.91
VEGFA-228ENST00000617771 PDGFRBP09619 1106 aa26.96■■□□□ 1.91
VEGFA-228ENST00000617771 MAGEA11P43364 429 aa26.96■■□□□ 1.91
VEGFA-228ENST00000617771 CASP4P49662 377 aa26.96■■□□□ 1.91
VEGFA-228ENST00000617771 DPYDQ12882 1025 aa26.96■■□□□ 1.91
VEGFA-228ENST00000617771 BIRC3Q13489 604 aa26.96■■□□□ 1.91
VEGFA-228ENST00000617771 CCDC142Q17RM4 750 aa26.96■■□□□ 1.91
VEGFA-228ENST00000617771 SDHAF4Q5VUM1 108 aa26.96■■□□□ 1.91
VEGFA-228ENST00000617771 SCN4BQ8IWT1 228 aa26.96■■□□□ 1.91
VEGFA-228ENST00000617771 MRPS31Q92665 395 aaKnown RBP26.96■■□□□ 1.91
VEGFA-228ENST00000617771 MIA3Q5JRA6 1907 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 SOBPA7XYQ1 873 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 ARNTLO00327 626 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 ATP2C2O75185 946 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 NOL4O94818 638 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 ZNF202O95125 648 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 GNL1P36915 607 aaPredicted RBP26.95■■□□□ 1.9
VEGFA-228ENST00000617771 MLLT6P55198 1093 aaPredicted RBP26.95■■□□□ 1.9
VEGFA-228ENST00000617771 MYL6P60660 151 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 ARHGAP29Q52LW3 1261 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 VSTM1Q6UX27 236 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 TMEM150AQ86TG1 271 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 CMTM8Q8IZV2 173 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 PLEKHO2Q8TD55 490 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 BPIFB1Q8TDL5 484 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 MYLPFQ96A32 169 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 CLDN23Q96B33 292 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 TRMT2BQ96GJ1 504 aaKnown RBP26.95■■□□□ 1.9
VEGFA-228ENST00000617771 MSANTD3Q96H12 275 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 MRPL45Q9BRJ2 306 aaKnown RBP26.95■■□□□ 1.9
VEGFA-228ENST00000617771 SLC46A2Q9BY10 475 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 CRTAC1Q9NQ79 661 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 SPATA6Q9NWH7 488 aaPredicted RBP26.95■■□□□ 1.9
VEGFA-228ENST00000617771 FRMD4BQ9Y2L6 1034 aa26.95■■□□□ 1.9
VEGFA-228ENST00000617771 PIEZO1Q92508 2521 aa26.94■■□□□ 1.9
VEGFA-228ENST00000617771 NUP210Q8TEM1 1887 aaPredicted RBP26.94■■□□□ 1.9
VEGFA-228ENST00000617771 SLC38A8A6NNN8 435 aa26.94■■□□□ 1.9
VEGFA-228ENST00000617771 LRRIQ3A6PVS8 624 aaPredicted RBP26.94■■□□□ 1.9
VEGFA-228ENST00000617771 PRAMEF12O95522 483 aa26.94■■□□□ 1.9
VEGFA-228ENST00000617771 AVPR1AP37288 418 aa26.94■■□□□ 1.9
VEGFA-228ENST00000617771 RPS9P46781 194 aaKnown RBP26.94■■□□□ 1.9
VEGFA-228ENST00000617771 CLDN10P78369 228 aa26.94■■□□□ 1.9
VEGFA-228ENST00000617771 NUCB2P80303 420 aa26.94■■□□□ 1.9
VEGFA-228ENST00000617771 C1orf228Q6PIY5 440 aa26.94■■□□□ 1.9
VEGFA-228ENST00000617771 CELF5Q8N6W0 485 aaKnown RBP26.94■■□□□ 1.9
VEGFA-228ENST00000617771 STKLD1Q8NE28 680 aa26.94■■□□□ 1.9
VEGFA-228ENST00000617771 OR6B3Q8NGW1 331 aa26.94■■□□□ 1.9
VEGFA-228ENST00000617771 FAM3CQ92520 227 aa26.94■■□□□ 1.9
VEGFA-228ENST00000617771 NKD2Q969F2 451 aaPredicted RBP26.94■■□□□ 1.9
VEGFA-228ENST00000617771 XYLT2Q9H1B5 865 aa26.94■■□□□ 1.9
VEGFA-228ENST00000617771 NXF1Q9UBU9 619 aaKnown RBP26.94■■□□□ 1.9
VEGFA-228ENST00000617771 NDRG2Q9UN36 371 aaKnown RBP26.94■■□□□ 1.9
VEGFA-228ENST00000617771 TRAF3IP3Q9Y228 551 aa26.94■■□□□ 1.9
VEGFA-228ENST00000617771 CACNA1HO95180 2353 aa26.93■■□□□ 1.9
VEGFA-228ENST00000617771 SHISA7A6NL88 538 aa26.93■■□□□ 1.9
VEGFA-228ENST00000617771 CLSTN1O94985 981 aa26.93■■□□□ 1.9
VEGFA-228ENST00000617771 PLCB2Q00722 1185 aa26.93■■□□□ 1.9
VEGFA-228ENST00000617771 CYP27A1Q02318 531 aa26.93■■□□□ 1.9
VEGFA-228ENST00000617771 KCNB1Q14721 858 aa26.93■■□□□ 1.9
VEGFA-228ENST00000617771 TDRD10Q5VZ19 366 aaKnown RBP26.93■■□□□ 1.9
VEGFA-228ENST00000617771 CEP135Q66GS9 1140 aa26.93■■□□□ 1.9
VEGFA-228ENST00000617771 MAB21L3Q8N8X9 362 aa26.93■■□□□ 1.9
VEGFA-228ENST00000617771 MYCBPAPQ8TBZ2 947 aa26.93■■□□□ 1.9
VEGFA-228ENST00000617771 MYRFLQ96LU7 910 aa26.93■■□□□ 1.9
VEGFA-228ENST00000617771 CEP295NLQ96MC4 621 aa26.93■■□□□ 1.9
VEGFA-228ENST00000617771 LRRC3BQ96PB8 259 aa26.93■■□□□ 1.9
VEGFA-228ENST00000617771 C8orf33Q9H7E9 229 aaPredicted RBP26.93■■□□□ 1.9
VEGFA-228ENST00000617771 VRTNQ9H8Y1 702 aa26.93■■□□□ 1.9
VEGFA-228ENST00000617771 THG1LQ9NWX6 298 aaKnown RBP26.93■■□□□ 1.9
VEGFA-228ENST00000617771 COL4A2P08572 1712 aa26.93■■□□□ 1.9
VEGFA-228ENST00000617771 LAMTOR5O43504 91 aa26.92■■□□□ 1.9
VEGFA-228ENST00000617771 BDNFP23560 247 aa26.92■■□□□ 1.9
VEGFA-228ENST00000617771 KPNA1P52294 538 aaPredicted RBP26.92■■□□□ 1.9
VEGFA-228ENST00000617771 ZNF699Q32M78 642 aa26.92■■□□□ 1.9
VEGFA-228ENST00000617771 ZC3H14Q6PJT7 736 aaKnown RBP26.92■■□□□ 1.9
VEGFA-228ENST00000617771 PCED1BQ96HM7 432 aa26.92■■□□□ 1.9
VEGFA-228ENST00000617771 KIF9Q9HAQ2 790 aa26.92■■□□□ 1.9
VEGFA-228ENST00000617771 TICRRQ7Z2Z1 1910 aa26.91■■□□□ 1.9
VEGFA-228ENST00000617771 GOLGA6L4A6NEF3 574 aa26.91■■□□□ 1.9
VEGFA-228ENST00000617771 PRR23AA6NEV1 266 aa26.91■■□□□ 1.9
VEGFA-228ENST00000617771 C4BPAP04003 597 aaKnown RBP26.91■■□□□ 1.9
VEGFA-228ENST00000617771 SP9P0CG40 484 aa26.91■■□□□ 1.9
VEGFA-228ENST00000617771 GRIK1P39086 918 aa26.91■■□□□ 1.9
VEGFA-228ENST00000617771 NCOA4Q13772 614 aa26.91■■□□□ 1.9
VEGFA-228ENST00000617771 ZNF667Q5HYK9 610 aa26.91■■□□□ 1.9
VEGFA-228ENST00000617771 MDH1BQ5I0G3 518 aa26.91■■□□□ 1.9
VEGFA-228ENST00000617771 TXNDC8Q6A555 127 aa26.91■■□□□ 1.9
VEGFA-228ENST00000617771 ASCL5Q7RTU5 278 aa26.91■■□□□ 1.9
VEGFA-228ENST00000617771 MON1AQ86VX9 555 aa26.91■■□□□ 1.9
VEGFA-228ENST00000617771 TMC2Q8TDI7 906 aa26.91■■□□□ 1.9
VEGFA-228ENST00000617771 SPATA17Q96L03 361 aa26.91■■□□□ 1.9
VEGFA-228ENST00000617771 SMG9Q9H0W8 520 aaKnown RBP26.91■■□□□ 1.9
VEGFA-228ENST00000617771 A8MXQ7 604 aa26.9■■□□□ 1.9
VEGFA-228ENST00000617771 TRIM66O15016 1216 aa26.9■■□□□ 1.9
VEGFA-228ENST00000617771 MAPK13O15264 365 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms