RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 FAM124BQ9H5Z6 455 aaPredicted RBP17.24■□□□□ 0.35
SNAP47-213ENST00000617596 CRTAC1Q9NQ79 661 aa17.24■□□□□ 0.35
SNAP47-213ENST00000617596 CYTH4Q9UIA0 394 aa17.24■□□□□ 0.35
SNAP47-213ENST00000617596 SALL4Q9UJQ4 1053 aa17.24■□□□□ 0.35
SNAP47-213ENST00000617596 PCDHB8Q9UN66 801 aa17.24■□□□□ 0.35
SNAP47-213ENST00000617596 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.24■□□□□ 0.35
SNAP47-213ENST00000617596 CDH23Q9H251 3354 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 MACROD2A1Z1Q3 448 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 M0QYV0 167 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 PTPN1P18031 435 aaKnown RBP17.23■□□□□ 0.35
SNAP47-213ENST00000617596 YWHAHQ04917 246 aaPredicted RBP17.23■□□□□ 0.35
SNAP47-213ENST00000617596 LLGL2Q6P1M3 1020 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 CC2D1AQ6P1N0 951 aaPredicted RBP17.23■□□□□ 0.35
SNAP47-213ENST00000617596 SRLQ86TD4 932 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 HERC6Q8IVU3 1022 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 CMTR2Q8IYT2 770 aaKnown RBP17.23■□□□□ 0.35
SNAP47-213ENST00000617596 SLC2A14Q8TDB8 520 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 TNIP3Q96KP6 325 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 VN1R3Q9BXE9 311 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 THAP2Q9H0W7 228 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 GTF3C4Q9UKN8 822 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 PCDHGC3Q9UN70 934 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 GRXCR1A8MXD5 290 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 MED7O43513 233 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 TRAPPC3O43617 180 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 RTN2O75298 545 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 SF3B1O75533 1304 aaKnown RBP eCLIP17.23■□□□□ 0.358e-6■■■■■ 107
SNAP47-213ENST00000617596 H2AFZP0C0S5 128 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 OR4Q2P0C623 313 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 OAS2P29728 719 aaKnown RBP17.23■□□□□ 0.35
SNAP47-213ENST00000617596 RABGGTBP53611 331 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 HTRA4P83105 476 aaPredicted RBP17.23■□□□□ 0.35
SNAP47-213ENST00000617596 SMC1AQ14683 1233 aaKnown RBP17.23■□□□□ 0.35
SNAP47-213ENST00000617596 CNGA2Q16280 664 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 RTP2Q5QGT7 225 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 FAM109BQ6ICB4 259 aaPredicted RBP17.23■□□□□ 0.35
SNAP47-213ENST00000617596 ACAD10Q6JQN1 1059 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 H2AFVQ71UI9 128 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 TTC30AQ86WT1 665 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 ARHGEF26Q96DR7 871 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 ISCUQ9H1K1 167 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 RSPH14Q9UHP6 348 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 DSEQ9UL01 958 aa17.23■□□□□ 0.35
SNAP47-213ENST00000617596 TLL1O43897 1013 aa17.22■□□□□ 0.35
SNAP47-213ENST00000617596 MYOGP15173 224 aa17.22■□□□□ 0.35
SNAP47-213ENST00000617596 KIF5AQ12840 1032 aa17.22■□□□□ 0.35
SNAP47-213ENST00000617596 VARS2Q5ST30 1063 aaKnown RBP17.22■□□□□ 0.35
SNAP47-213ENST00000617596 LCLAT1Q6UWP7 414 aa17.22■□□□□ 0.35
SNAP47-213ENST00000617596 LRRTM3Q86VH5 581 aa17.22■□□□□ 0.35
SNAP47-213ENST00000617596 IGSF21Q96ID5 467 aa17.22■□□□□ 0.35
SNAP47-213ENST00000617596 ZNF558Q96NG5 402 aa17.22■□□□□ 0.35
SNAP47-213ENST00000617596 C11orf70Q9BRQ4 267 aa17.22■□□□□ 0.35
SNAP47-213ENST00000617596 RHOBTB2Q9BYZ6 727 aa17.22■□□□□ 0.35
SNAP47-213ENST00000617596 TMLHEQ9NVH6 421 aa17.22■□□□□ 0.35
SNAP47-213ENST00000617596 TJP2Q9UDY2 1190 aa17.22■□□□□ 0.35
SNAP47-213ENST00000617596 NR2E3Q9Y5X4 410 aa17.22■□□□□ 0.35
SNAP47-213ENST00000617596 PIK3R2O00459 728 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 BUB1O43683 1085 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 FAM163BP0C2L3 166 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 GZMAP12544 262 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 TYMPP19971 482 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 NSFP46459 744 aaKnown RBP17.21■□□□□ 0.35
SNAP47-213ENST00000617596 CENPCQ03188 943 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 SHHQ15465 462 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 MMS22LQ6ZRQ5 1243 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 PAQR9Q6ZVX9 377 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 FUKQ8N0W3 1084 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 COLGALT1Q8NBJ5 622 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 SECISBP2LQ93073 1101 aaKnown RBP17.21■□□□□ 0.35
SNAP47-213ENST00000617596 PCED1BQ96HM7 432 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 ARFGAP3Q9NP61 516 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 MYO1AQ9UBC5 1043 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 KIAA1257Q9ULG3 409 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 LINC00271P0C7V0 271 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 CHRM1P11229 460 aaPredicted RBP17.21■□□□□ 0.35
SNAP47-213ENST00000617596 FGFR3P22607 806 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 PAX3P23760 479 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 ACTN2P35609 894 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 GPD2P43304 727 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 BRD3Q15059 726 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 PRSS55Q6UWB4 352 aaPredicted RBP17.21■□□□□ 0.35
SNAP47-213ENST00000617596 SPRED2Q7Z698 418 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 FIBCD1Q8N539 461 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 TMEM35BQ8NCS4 154 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 HNRNPLLQ8WVV9 542 aaKnown RBP17.21■□□□□ 0.35
SNAP47-213ENST00000617596 SLC9A7Q96T83 725 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 ACBD6Q9BR61 282 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 B3GNT5Q9BYG0 378 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 LUC7LQ9NQ29 371 aaKnown RBP17.21■□□□□ 0.35
SNAP47-213ENST00000617596 CDH9Q9ULB4 789 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 INSL6Q9Y581 213 aa17.21■□□□□ 0.35
SNAP47-213ENST00000617596 TSC2P49815 1807 aa17.2■□□□□ 0.34
SNAP47-213ENST00000617596 CCDC151A5D8V7 595 aa17.2■□□□□ 0.34
SNAP47-213ENST00000617596 C2CD2LO14523 706 aa17.2■□□□□ 0.34
SNAP47-213ENST00000617596 SYN3O14994 580 aa17.2■□□□□ 0.34
SNAP47-213ENST00000617596 PCSK1P29120 753 aa17.2■□□□□ 0.34
SNAP47-213ENST00000617596 RGS7P49802 495 aa17.2■□□□□ 0.34
SNAP47-213ENST00000617596 INTS6LQ5JSJ4 861 aaKnown RBP17.2■□□□□ 0.34
SNAP47-213ENST00000617596 C10orf76Q5T2E6 689 aa17.2■□□□□ 0.34
SNAP47-213ENST00000617596 ICE2Q659A1 982 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms