RNA–Protein interactions for RNA: ENST00000617489.1

MALAT1-210, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2 BASIC

Gene MALAT1, Length 318 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-210ENST00000617489 NECTIN1Q15223 517 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 TIGD2Q4W5G0 525 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 TM4SF20Q53R12 229 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 IFIT1BQ5T764 474 aaKnown RBP4.99□□□□□ -1.61
MALAT1-210ENST00000617489 WDR78Q5VTH9 848 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 LRCH2Q5VUJ6 765 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 SYCE2Q6PIF2 218 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 FAM160B2Q86V87 743 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 NOSTRINQ8IVI9 506 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 FAM43AQ8N2R8 423 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 ANKRD13CQ8N6S4 541 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 CPT1CQ8TCG5 803 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 ACER1Q8TDN7 264 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 ZNF669Q96BR6 464 aaPredicted RBP4.99□□□□□ -1.61
MALAT1-210ENST00000617489 CEP95Q96GE4 821 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 C12orf42Q96LP6 360 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 NEK1Q96PY6 1258 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 P2RX7Q99572 595 aaKnown RBP4.99□□□□□ -1.61
MALAT1-210ENST00000617489 RPAP3Q9H6T3 665 aaPredicted RBP4.99□□□□□ -1.61
MALAT1-210ENST00000617489 DNAJC18Q9H819 358 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 TRPS1Q9UHF7 1281 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 PFDN2Q9UHV9 154 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 CPA4Q9UI42 421 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 FEM1BQ9UK73 627 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 SORCS3Q9UPU3 1222 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 RABGAP1Q9Y3P9 1069 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 MAST2Q6P0Q8 1798 aa4.99□□□□□ -1.61
MALAT1-210ENST00000617489 BAZ2AQ9UIF9 1905 aaKnown RBP4.98□□□□□ -1.61
MALAT1-210ENST00000617489 A0A1W2PRG0 241 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 SLC12A8A0AV02 714 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 TMEM232C9JQI7 657 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 DAPK3O43293 454 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 STRNO43815 780 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 B3GALT2O43825 422 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 DHX16O60231 1041 aaKnown RBP4.98□□□□□ -1.61
MALAT1-210ENST00000617489 SLC25A27O95847 323 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 CYP21A2P08686 494 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 C6orf222P0C671 652 aaPredicted RBP4.98□□□□□ -1.61
MALAT1-210ENST00000617489 CALM1P0DP23 149 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 CALM2P0DP24 149 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 CALM3P0DP25 149 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 HSPA8P11142 646 aaKnown RBP4.98□□□□□ -1.61
MALAT1-210ENST00000617489 CD38P28907 300 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 MAPK4P31152 587 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 KIF5BP33176 963 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 GUCY1A2P33402 732 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 COPB2P35606 906 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 PSMC4P43686 418 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 GNAQP50148 359 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 STAT2P52630 851 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 ALDH6A1Q02252 535 aaKnown RBP4.98□□□□□ -1.61
MALAT1-210ENST00000617489 WTAPQ15007 396 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 CCDC96Q2M329 555 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 GPATCH4Q5T3I0 446 aaKnown RBP4.98□□□□□ -1.61
MALAT1-210ENST00000617489 CREB3L3Q68CJ9 461 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 C17orf99Q6UX52 265 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 SPATC1Q76KD6 591 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 CTU1Q7Z7A3 348 aaKnown RBP4.98□□□□□ -1.61
MALAT1-210ENST00000617489 CATIPQ7Z7H3 387 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 ADGRG3Q86Y34 549 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 SPICE1Q8N0Z3 855 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 PLA2G15Q8NCC3 412 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 GMCL1P1Q8NEA9 526 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 RAET1EQ8TD07 263 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 THAP3Q8WTV1 239 aaPredicted RBP4.98□□□□□ -1.61
MALAT1-210ENST00000617489 CHMP4CQ96CF2 233 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 PAGR1Q9BTK6 254 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 LSG1Q9H089 658 aaKnown RBP4.98□□□□□ -1.61
MALAT1-210ENST00000617489 COQ6Q9Y2Z9 468 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 TRIM17Q9Y577 477 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 B3GALT1Q9Y5Z6 326 aa4.98□□□□□ -1.61
MALAT1-210ENST00000617489 MYPNQ86TC9 1320 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 FOCADQ5VW36 1801 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 SSC5DA1L4H1 1573 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 B4DLN1 442 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 TNPO2O14787 897 aaKnown RBP4.97□□□□□ -1.61
MALAT1-210ENST00000617489 KIAA0355O15063 1070 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 PLA2G6O60733 806 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 MAFO75444 373 aaPredicted RBP4.97□□□□□ -1.61
MALAT1-210ENST00000617489 RECQL4O94761 1208 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 PARP1P09874 1014 aaKnown RBP4.97□□□□□ -1.61
MALAT1-210ENST00000617489 VCAM1P19320 739 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 SDHAP31040 664 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 MRPL12P52815 198 aaKnown RBP4.97□□□□□ -1.61
MALAT1-210ENST00000617489 ANTXR2P58335 489 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 UBXN2AP68543 259 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 SSRP1Q08945 709 aaKnown RBP4.97□□□□□ -1.61
MALAT1-210ENST00000617489 RAB33AQ14088 237 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 PPP2R5BQ15173 497 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 DGKDQ16760 1214 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 FAM110CQ1W6H9 321 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 MTERF2Q49AM1 385 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 GAGE13Q4V321 117 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 FAM83BQ5T0W9 1011 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 TREML2Q5T2D2 321 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 HECTD2Q5U5R9 776 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 FSTL4Q6MZW2 842 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 BLOC1S2Q6QNY1 142 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 RHOUQ7L0Q8 258 aa4.97□□□□□ -1.61
MALAT1-210ENST00000617489 DPP9Q86TI2 863 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms