RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 ECT2Q9H8V3 914 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 MGAMO43451 1857 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 CTNNA2P26232 953 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 TRPC3Q13507 836 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 CUL1Q13616 776 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 ATP13A4Q4VNC1 1196 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 SPRYD7Q5W111 196 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 CCDC137Q6PK04 289 aaKnown RBP12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 DPP9Q86TI2 863 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 LRRC34Q8IZ02 419 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 TEX9Q8N6V9 391 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 C1orf127Q8N9H9 656 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 NPLOC4Q8TAT6 608 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 SEC14L1Q92503 715 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 LRRC45Q96CN5 670 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 RBM41Q96IZ5 413 aaKnown RBP12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 NIF3L1Q9GZT8 377 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 C2orf40Q9H1Z8 148 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 CHST7Q9NS84 486 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 SAMD15Q9P1V8 674 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 IVNS1ABPQ9Y6Y0 642 aa12.04□□□□□ -0.48
PCDHGA9-202ENST00000616887 LACTBL1A8MY62 500 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 GAS2O43903 313 aaKnown RBP12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 GH1P01241 217 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 FAM163BP0C2L3 166 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 ARF4P18085 180 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 TBXAS1P24557 533 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 PLTPP55058 493 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 POLE2P56282 527 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 TFDP1Q14186 410 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 ITIH4Q14624 930 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 LRRC23Q53EV4 343 aaPredicted RBP12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 DUPD1Q68J44 220 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 JADE1Q6IE81 842 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 PIGWQ7Z7B1 504 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 ZNF677Q86XU0 584 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 FBXO25Q8TCJ0 367 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 KLHL29Q96CT2 875 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 TWNKQ96RR1 684 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 SYT15Q9BQS2 421 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 ERP44Q9BS26 406 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 TRIM4Q9C037 500 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 SDCBP2Q9H190 292 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 PDZD7Q9H5P4 517 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 CNTN6Q9UQ52 1028 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 R3HDM2Q9Y2K5 976 aaKnown RBP12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 H3BRB1 525 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 TLR3O15455 904 aaKnown RBP12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 ITGB3P05106 788 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 STAG3L1P0CL83 205 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 PCK1P35558 622 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 RPL21P46778 160 aaKnown RBP12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 SLC26A2P50443 739 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 BPIFB4P59827 614 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 DHX9Q08211 1270 aaKnown RBP12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 ZNF252P-AS1Q0IIN9 211 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 LAMC2Q13753 1193 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 WDR72Q3MJ13 1102 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 ZDHHC24Q6UX98 284 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 TMC3Q7Z5M5 1100 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 KIAA0319LQ8IZA0 1049 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 WDTC1Q8N5D0 677 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 PPTC7Q8NI37 304 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 NLRP7Q8WX94 980 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 DDX27Q96GQ7 796 aaKnown RBP12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 MAML3Q96JK9 1138 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 TUT1Q9H6E5 874 aaKnown RBP12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 SMYD3Q9H7B4 428 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 CPA4Q9UI42 421 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 ATP8A1Q9Y2Q0 1164 aa12.03□□□□□ -0.48
PCDHGA9-202ENST00000616887 ASAP2O43150 1006 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 VIMP08670 466 aaKnown RBP12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 CHN1P15882 459 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 OGDHQ02218 1023 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 CUL3Q13618 768 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 TRIP13Q15645 432 aaPredicted RBP12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 MARCH8Q5T0T0 291 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 TXNRD3NBQ6F5E7 133 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 RGMBQ6NW40 437 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 PRUNE1Q86TP1 453 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 CCDC105Q8IYK2 499 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 LINC01465Q8N7H1 131 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 ZFAND2BQ8WV99 257 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 NAP1L3Q99457 506 aaPredicted RBP12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 PARK7Q99497 189 aaKnown RBP12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 SELENOSQ9BQE4 189 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 AVENQ9NQS1 362 aaPredicted RBP12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 ZDHHC18Q9NUE0 388 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 GRHL1Q9NZI5 618 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 WDR35Q9P2L0 1181 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 CYTH4Q9UIA0 394 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 TNFSF13BQ9Y275 285 aa12.02□□□□□ -0.48
PCDHGA9-202ENST00000616887 PLXNB2O15031 1838 aa12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 PI4K2BG5E9Z4 385 aa12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 SHBGP04278 402 aa12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 HSPA6P17066 643 aa12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 ALDH3A1P30838 453 aa12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 MSH2P43246 934 aa12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 PSMC4P43686 418 aa12.02□□□□□ -0.49
PCDHGA9-202ENST00000616887 ZNF157P51786 506 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms