RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 RNF39Q9H2S5 420 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 ZWILCHQ9H900 591 aa16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 METTL5Q9NRN9 209 aaKnown RBP16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.43■□□□□ 0.22
SEMA3B-212ENST00000616701 PSTPIP1O43586 416 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 GRM5P41594 1212 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 KCNT1Q5JUK3 1230 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 C17orf99Q6UX52 265 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 MFSD7Q6UXD7 560 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 IFNL1Q8IU54 200 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 KLHL23Q8NBE8 558 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 MRPL45Q9BRJ2 306 aaKnown RBP16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 AP5M1Q9H0R1 490 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 ASIC3Q9UHC3 531 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 CYP3A5P20815 502 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 PSMA2P25787 234 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 RGMBQ6NW40 437 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 SLC27A1Q6PCB7 646 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 SAPCD2Q86UD0 394 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 RAPGEF5Q92565 580 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 SH3GL3Q99963 347 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 DCLK3Q9C098 648 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 ARHGAP39Q9C0H5 1083 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 LRRC19Q9H756 370 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 FAM49BQ9NUQ9 324 aa16.42■□□□□ 0.22
SEMA3B-212ENST00000616701 MANSC4A6NHS7 340 aaPredicted RBP16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 MED7O43513 233 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 RECQL4O94761 1208 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 KRT3P12035 628 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 DARSP14868 501 aaKnown RBP16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 RGS7P49802 495 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 CRHR2Q13324 411 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 GOLGA2P5Q9HBQ8 144 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 ENO4A6NNW6 628 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 H0YGN5 161 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 COQ9O75208 318 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 GRAP2O75791 330 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 CDH5P33151 784 aaPredicted RBP16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 CLNS1AP54105 237 aaKnown RBP16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 ZNF844Q08AG5 666 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 CHADLQ6NUI6 762 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 KATNAL2Q8IYT4 538 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 EIF1ADQ8N9N8 165 aaKnown RBP16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 C3orf20Q8ND61 904 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 ZNF518BQ9C0D4 1074 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 KDM4CQ9H3R0 1056 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 PARP2Q9UGN5 583 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 PCSK1NQ9UHG2 260 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 ITGA11Q9UKX5 1188 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 C2CD2Q9Y426 696 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 NFS1Q9Y697 457 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 PASKQ96RG2 1323 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 SMIM23A6NLE4 172 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 PODXLO00592 558 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 SHBGP04278 402 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 PYGLP06737 847 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 C6orf222P0C671 652 aaPredicted RBP16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 ATICP31939 592 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 HPDP32754 393 aaPredicted RBP16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 NFX1Q12986 1120 aaKnown RBP16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 ODF2Q5BJF6 829 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 PPP1R15BQ5SWA1 713 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 NOTUMQ6P988 496 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 ACOT1Q86TX2 421 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 ARMC2Q8NEN0 867 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.41■□□□□ 0.223e-6■■■■■ 50.8
SEMA3B-212ENST00000616701 PWWP2AQ96N64 755 aa16.41■□□□□ 0.22
SEMA3B-212ENST00000616701 SMIM35A0A1B0GVV1 85 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 LRRD1A4D1F6 860 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 PAEPP09466 180 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 P4HA1P13674 534 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 RGS2P41220 211 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 FNTAP49354 379 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 SNX17Q15036 470 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 PIWIL1Q96J94 861 aaKnown RBP16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 BARX2Q9UMQ3 279 aaPredicted RBP16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 NME7Q9Y5B8 376 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 YARSP54577 528 aaKnown RBP16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 DYNLT1P63172 113 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 KLF1Q13351 362 aaPredicted RBP16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 NAA25Q14CX7 972 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 DCAF4L1Q3SXM0 396 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 RAB6CQ53S08 254 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 FAM182AQ5T1J6 154 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 XYLT1Q86Y38 959 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 C12orf50Q8NA57 414 aaPredicted RBP16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 USP6NLQ92738 828 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 SNX27Q96L92 541 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 SLITRK1Q96PX8 696 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 RAB6CQ9H0N0 254 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 TSPAN16Q9UKR8 245 aa16.4■□□□□ 0.22
SEMA3B-212ENST00000616701 MBLAC1A4D2B0 266 aaPredicted RBP16.39■□□□□ 0.21
SEMA3B-212ENST00000616701 PDCLQ13371 301 aa16.39■□□□□ 0.21
SEMA3B-212ENST00000616701 FSCN1Q16658 493 aaKnown RBP16.39■□□□□ 0.21
SEMA3B-212ENST00000616701 ARFGAP1Q8N6T3 406 aa16.39■□□□□ 0.21
SEMA3B-212ENST00000616701 TRPV1Q8NER1 839 aa16.39■□□□□ 0.21
SEMA3B-212ENST00000616701 EXD1Q8NHP7 514 aa16.39■□□□□ 0.21
SEMA3B-212ENST00000616701 MICAL1Q8TDZ2 1067 aa16.39■□□□□ 0.21
SEMA3B-212ENST00000616701 SEMA4AQ9H3S1 761 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms